Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1085 114 1e-20 seq397 109 6e-19 seq176 109 6e-19 seq2219 107 2e-18 seq2345 102 9e-17 seq860 100 3e-16 seq2504 96.9 4e-15 seq349 93.3 5e-14 seq2799 89.7 6e-13 seq801 89.7 6e-13 seq1392 86.0 7e-12 seq664 86.0 7e-12 seq3549 84.2 3e-11 seq1614 82.4 9e-11 >seq1085 Length=677474 Score = 114 bits (126), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 386303 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 386244 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 386243 TCACCACTATACTACCGAGGA 386223 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| |||||||| ||||||||||| |||| Sbjct 245407 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCAGTCTCCCGTGTGACAGGCGGGGATAC 245466 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 245467 TGACCACTATACTACCGAGGAT 245488 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||| ||||||||||||| |||| Sbjct 249669 AAAAAGGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGCGTGACAGGCGGGGATAC 249610 Query 60117 TCACCACTATACTACCGAGGAT 60138 | ||||||||||| |||||||| Sbjct 249609 TGACCACTATACTTCCGAGGAT 249588 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| || ||| |||||| || ||||||||||||||| || ||||| ||||||| Sbjct 368622 CTCCCCGGCGGGAAATGGAACCCCGGACTCCCGCGTGACAGGTGGGGATACTGACCACTA 368681 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 368682 TACTACCGAGGATT 368695 >seq397 Length=591319 Score = 109 bits (120), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 519856 AAAAAGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 519915 Query 60118 CACCACTATACTACCGAGGA 60137 ||||||||||||||||||| Sbjct 519916 GACCACTATACTACCGAGGA 519935 >seq176 Length=862448 Score = 109 bits (120), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 59588 AAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 59647 Query 60118 CACCACTATACTACCGAGGA 60137 ||||||||||||||||||| Sbjct 59648 GACCACTATACTACCGAGGA 59667 >seq2219 Length=264639 Score = 107 bits (118), Expect = 2e-18 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 || || ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 252579 TTAATAAAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 252638 Query 60111 ACATACTCACCACTATACTACCGAGGA 60137 ||||| ||||||||||||||||||| Sbjct 252639 GGATACTGACCACTATACTACCGAGGA 252665 >seq2345 Length=142492 Score = 102 bits (112), Expect = 9e-17 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| |||||||| |||||||||||| ||||| ||||||| Sbjct 112288 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 112229 Query 60126 TACTACCGAGGATTGAATATA 60146 |||||||||||| ||| |||| Sbjct 112228 TACTACCGAGGA-TGACTATA 112209 >seq860 Length=314394 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 307633 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGCGGATACTGACCACT 307692 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 307693 ATACTACCGAGGA 307705 Score = 96.9 bits (106), Expect = 4e-15 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||| | |||||| ||||||||||||||||||||| |||| ||||| Sbjct 288387 TTCTCCCCGGCGGGGAGTTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACAGACCAC 288446 Query 60124 TATACTACCGAGG--ATTGAATATATA 60148 ||||||||||||| ||| || ||||| Sbjct 288447 TATACTACCGAGGATATTTAACATATA 288473 >seq2504 Length=314902 Score = 96.9 bits (106), Expect = 4e-15 Identities = 76/89 (85%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 60056 GAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| |||||| |||| |||| |||||||| ||| | ||||||||||||||| ||| Sbjct 249577 GAAAAAAATTCTCCCCGGC-GGGAGTCGAACCCCGGTGTACCGCGTGACAGGCGGGGATA 249519 Query 60116 CTCACCACTATACTACCGAGGA--TTGAA 60142 || ||||||||||||||||||| ||||| Sbjct 249518 CTGACCACTATACTACCGAGGACCTTGAA 249490 >seq349 Length=517220 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60055 TGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| | ||||| | || |||| ||||| || || |||||||||||||||||| || Sbjct 292878 TGAAAAAATATCTCCCCAGCGGGGATTCGAATCCCGGACTCCCGCGTGACAGGCGGGGAT 292937 Query 60115 ACTCACCACTATACTACCGAG 60135 ||| ||||||||||||||||| Sbjct 292938 ACTGACCACTATACTACCGAG 292958 >seq2799 Length=232176 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||| |||||||| ||||||||||||||||||||| ||||| ||| ||| Sbjct 296 CTCCCCGGCGGGGGATCGAACCGCGGTCTCCCGCGTGACAGGCGGGGATACTGACCCCTA 237 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 236 TACTACCGAGGA 225 >seq801 Length=327833 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||||||| |||||| |||||| ||||| ||||||||| ||||| ||||| ||||| Sbjct 169238 TTCTCCTCGGTGGGGAATAGAACCCAGGTCTACCGCGTGACTGGCGGGGATACTGACCAC 169179 Query 60124 TATACTACCGAGGA 60137 || ||||||||||| Sbjct 169178 TACACTACCGAGGA 169165 >seq1392 Length=293421 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| ||||| || | ||||| ||||||| | |||||| ||||||||||||| |||| Sbjct 222534 AAAAATAATCTCCCCGCCGGGGAACCGAACCCCGTTCTCCCACGTGACAGGCGGAGATAC 222475 Query 60117 TCACCACT-ATACTACCGAGGA 60137 | || ||| ||||||||||||| Sbjct 222474 TGACTACTGATACTACCGAGGA 222453 >seq664 Length=484775 Score = 86.0 bits (94), Expect = 7e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| ||||| |||||||| | ||||| || | || |||| |||||| ||||| || | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112 | | ||||||||||| | || | | |||||||||| ||| | || | ||| | || Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCC-TGAATCTTGGCTTTCACGTTC 443938 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | || || || | ||||| || || || || |||||||| ||| Sbjct 443937 TCAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACA 443878 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 443877 AATATCTGCAT 443867 >seq3549 Length=205378 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 6/81 (7%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||||||||| ||||||||||||||||| |||| Sbjct 123559 AAAAAAGTTCTCCCCGGCGGGGAATCGAACC------TCCCGCGTGACAGGCGGGGATAC 123506 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||| |||||||||||| Sbjct 123505 TGACCACTGTACTACCGAGGA 123485 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/88 (82%), Gaps = 4/88 (5%) Strand=Plus/Plus Query 60054 ATGAAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| ||||| |||||| |||| |||||| |||||| |||||| |||||||||||||| Sbjct 137210 ATGGAAAATAATTCTCCCCGGCGGGGAATGGAACCCCGGTCTCTCGCGTGACAGGCGGGG 137269 Query 60113 ATACT---CACCACTATACTACCGAGGA 60137 ||||| |||| ||||||| |||||| Sbjct 137270 ATACTGTATACCAATATACTATCGAGGA 137297 >seq1614 Length=407421 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| ||| ||||||||||||| ||||||| ||||||||| ||| ||||| ||| || Sbjct 307521 TCTCCCCGGAGGGGAATCGAACCCCGGTCTCCAGCGTGACAGTCGGTTATACTGACCTCT 307462 Query 60125 ATACTACCGA 60134 |||||||||| Sbjct 307461 ATACTACCGA 307452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571754013882880