Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq664 91.5 1e-13 seq3317 82.4 6e-11 >seq664 Length=484775 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 |||||||||||||||| ||| || ||| | || || | || ||||| || || | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 |||| ||||| ||||| || || | |||||||||||| ||| || || || | Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCT 443937 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| ||| || |||| ||| || ||||| || ||||| |||||||||| Sbjct 443936 CAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAA 443877 Query 45327 AGATTTGCAT 45336 | || ||||| Sbjct 443876 ATATCTGCAT 443867 >seq3317 Length=93551 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || |||| || ||||||||||| ||||| | ||| ||||| || || | || |||||| Sbjct 55707 TCTTCCAACTGCTTTCCGGCGAAAATCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTG 55766 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| |||||| ||| || | | |||| | ||||| || | ||||| Sbjct 55767 TCCTGTATTTTTGCCTTCACATTTTCTATTGTGTCAGACGCTTCCACTTCAAGCGTAATA 55826 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||||| ||||||||| ||||| ||||| Sbjct 55827 GTCTTTCCCGTCAAAGTCTTCACGAAGATCTGCAT 55861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395032365946816