Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4065 123 2e-23 >seq4065 Length=69253 Score = 123 bits (136), Expect = 2e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 14006 ACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGAC 14065 || || |||||||| ||||| | || || | ||| |||| |||||||||||| || Sbjct 28550 ACCTTTTCACAACCAAGTTCCACCAGCAAGCGATCAGCAACAAACTCAATATATCTGCAC 28491 Query 14066 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTT 14125 || | | |||| |||||||| || | | ||| || | | || || || ||||| | | Sbjct 28490 ATGAGAACACAGTTCATACCAATCATGTCTACTGGTAATGCATCTGTCAAGAATTCCTGT 28431 Query 14126 TCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT 14185 || || | ||||||||| ||| || | || || |||| |||| ||| ||| Sbjct 28430 TCAATGGCCACAGCCTCTCTTACGATGCTTGTTATCTTTTCGTTAGTCGGACGATTGACC 28371 Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228 ||||||||||| |||| ||| |||||||| ||||||||||||| Sbjct 28370 AGATGTTTAAACATTAGACAAGCAAAATCGCAATGAAGGCCCT 28328 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||| | ||||||||| || || || || || |||||||| | || | |||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||||| || | ||| |||||||| || || |||||||| ||||||| |||||||| Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTT 14373 | | | ||||||||||| | ||| || Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTT 27999 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 |||||| ||||| || ||||| |||||||| || || | |||||||| || ||||| Sbjct 27759 AATGTAAGTATCGATGAGTAACGAGTACATTTCTGAATGCACATTTTCCATTGCAATCTG 27700 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 || ||||||||||| | ||||| | |||||||||| | || ||||| | | Sbjct 27699 GAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTTCCACGAG 27640 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14631 |||||| || || || ||||| ||| |||||||| || Sbjct 27639 ATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGC 27601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482291963169280