Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4065 111 1e-19 seq2351 111 1e-19 seq3317 100 3e-16 >seq4065 Length=69253 Score = 111 bits (122), Expect = 1e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || ||||| || || || ||||| ||||| ||||| ||| | || ||||| || ||| Sbjct 27601 GCCTTTTTTGCTGCTTCAGATGGCATTGTGAACGAAAATCTCGTGGAAAGGTTCAGCCAA 27660 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 || || ||| | | || ||| | || ||||| || || || | || || ||||| ||| Sbjct 27661 GAGGTACAAATACCCGAAGCGCGGTGTTTTTATGGCTTCCAGATTGCAATGGAAAATGTG 27720 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 |||||||||||||| ||| ||||||||||||| ||| | || || Sbjct 27721 CATTCAGAAATGTACTCGTTACTCATCGATACTTACATTAAAGA 27764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 124/167 (74%), Gaps = 8/167 (5%) Strand=Plus/Plus Query 57508 ATGAACCACTTTTGC---AAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564 ||||||| ||||| |||| || || || |||| ||||| ||||| ||| | |||| Sbjct 27326 ATGAACC---TTTGCTTAAAGAAAACCCTCGACGATTCGTCATTTTTCCTATTCAGTATC 27382 Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624 || || ||||| ||||| || ||||| ||||| ||||||||||| || || ||||||| Sbjct 27383 ACGATATATGGAAGATGTATAAGAAGGCGGAAGCGTCGTTTTGGACTGTTGAGGAAGTAG 27442 Query 57625 ACCTGTCTAAGGATCTGAGCGATTGGGATTCC-CTCAAAGAATCTGA 57670 | || || |||| | | | ||| | ||||| |||| | |||| || Sbjct 27443 ATCTTTCGAAGG-TATTAAAGATGCGAATTCCGCTCATAAAATCGGA 27488 >seq2351 Length=162851 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || | ||| || ||||| || || ||||| || || || || | Sbjct 160783 TCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGCATAGAAGAGATCACGAGCTCTG 160724 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 |||||||| || || ||||||||||||||||| ||||| || || | || | ||||||| Sbjct 160723 ACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAAGATATCAGAATGCCAC 160664 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 || || | ||||| |||||| || || || |||| Sbjct 160663 GGTTCCAAGTAAATGGCAAATGCACCAGGCCTCT 160630 >seq3317 Length=93551 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || || || | || || ||| |||| Sbjct 55861 ATGCAGATCTTCGTGAAGACTTTGACGGGAAAGACTATTACGCTTGAAGTGGAAGCGTCT 55802 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | |||| ||||||||||||| | ||||| |||||| Sbjct 55801 GACACAATAGAAAATGTGAAGGCAAAAATACAGGACAAGGAAGGCATCCCGCCTGACCAG 55742 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || || ||||||||||| | ||| | |||||||| Sbjct 55741 CAGAGATTGATTTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTATCTGATTATAAT 55682 Query 31373 ATTCAAAAAG 31382 ||||| |||| Sbjct 55681 ATTCAGAAAG 55672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445716830776320