Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq867 123 5e-23 seq4065 86.0 1e-11 >seq867 Length=826539 Score = 123 bits (136), Expect = 5e-23 Identities = 230/335 (69%), Gaps = 12/335 (4%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT-----G 35450 || || ||||| || || || || || |||||| | |||||||| || ||||| | Sbjct 763127 GGTGACTTGGGCCCTGTGTATGGTTTTCAATGGAGGCATTTTGGAGCAAAATATAGGGGG 763068 Query 35451 ATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510 || | || | | ||| ||||| ||||| | || ||| | || | || | | | Sbjct 763067 ATGCATGA-----CAACTATTCTGGAGAGGGTGTGGACCAACTTGCACAAGTAATTGAAA 763013 Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 | | | ||||||| ||||||||||||| || ||| || ||||||||| | || Sbjct 763012 CTATACGTACAAATCCAAATGATAGAAGGATAATGATGTGCGCTTGGAATCCTGTTGACA 762953 Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGA 35629 | | | ||||| ||||| || |||||| || || | || |||||||| || ||||| Sbjct 762952 TACCACGAATGGCACTTCCCCCGTGCCAC-TGCCTTGTACAGTTTTATGTTGCGAATGGT 762894 Query 35630 GAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAAT 35689 || ||||| ||||||||||||||| || | ||| | || | || || || ||||| Sbjct 762893 GAGTTGTCATGCCAGTTGTATCAGAGATCTGCTGATATGGGACTTGGTGTCCCATTCAAC 762834 Query 35690 ATTGCATCATACTCTCTTCTGACTCATCTGATGGC 35724 |||||| || |||| ||||| || |||| || Sbjct 762833 ATTGCAAGCTATGCTCTGCTGACATATATGATTGC 762799 >seq4065 Length=69253 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/139 (74%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 101901 ATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCAT 101960 |||||| | ||| |||||||| |||||| ||||||||||||| || || ||| ||| Sbjct 28007 ATTTGGAG-AACGCATTGTTGCGTTTGCTTCAGTTGAAGGAATATTTTTCTCTGGATCAT 28065 Query 101961 TCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATG 102020 | || ||||| || ||| | || || ||||| | |||| || | |||| |||||||| Sbjct 28066 TTGCTTCCATCTTTTGGCTTAAAAAGAGGGGCCTCATGCCAGGGTTGACCTTCTCCAATG 28125 Query 102021 AGTTCATTTCTAGGGACGA 102039 | | |||||| | || || Sbjct 28126 AACTTATTTCTCGAGATGA 28144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989471207215680