Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4065 136 4e-27 >seq4065 Length=69253 Score = 136 bits (150), Expect = 4e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 13674 ACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGAC 13733 || || |||||||| ||||| | || || | |||||||| ||||||||||||| || Sbjct 28550 ACCTTTTCACAACCAAGTTCCACCAGCAAGCGATCAGCAACAAACTCAATATATCTGCAC 28491 Query 13734 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTT 13793 || | | |||| |||||||| || | | ||| || | | || || || ||||| | | Sbjct 28490 ATGAGAACACAGTTCATACCAATCATGTCTACTGGTAATGCATCTGTCAAGAATTCCTGT 28431 Query 13794 TCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT 13853 || || | |||||||||| ||| || |||| || | || |||| ||| ||| Sbjct 28430 TCAATGGCCACAGCCTCTCTTACGATGCTTGTTATCTTTTCGTTAGTCGGACGATTGACC 28371 Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 13896 ||||||||||| |||| ||| |||||||| ||||||||||||| Sbjct 28370 AGATGTTTAAACATTAGACAAGCAAAATCGCAATGAAGGCCCT 28328 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||| | ||||||||| || || || || || |||||||| | || | |||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | |||||| || | ||||||||| || || || |||||||| ||||||| |||||||| Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTT 14041 | | | ||||||||||| | ||| || Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTT 27999 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/134 (75%), Gaps = 3/134 (2%) Strand=Plus/Minus Query 14359 CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTA 14418 |||| |||||||||||||| ||||| |||||||| || | || || |||||||| Sbjct 27454 CCTTCGAAAGATCTACTTCCTCAACAGTCCAAAACGACGCTTCCGCCTTCTTATACATCT 27395 Query 14419 CCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TCGAAGATGTTTCTTTAAGA 14477 |||||| || | ||| |||||||||| || |||| |||| | | |||||||||| Sbjct 27394 TCCATATATCGTGATACTGAATAGGAAAAATGACGAATCGTCGAGGGT-TTTCTTTAAGC 27336 Query 14478 ATTGGTTCCATTTT 14491 | |||| |||||| Sbjct 27335 AAAGGTT-CATTTT 27323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479674654246400