Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4065 118 1e-21 >seq4065 Length=69253 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 13462 ACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGAC 13521 || || |||||||| ||||| | | || | |||||||| ||||||||||||| || Sbjct 28550 ACCTTTTCACAACCAAGTTCCACCAGCAAGCGATCAGCAACAAACTCAATATATCTGCAC 28491 Query 13522 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTT 13581 || | | |||| |||||||| || | | ||| || | | || || || ||||| | | Sbjct 28490 ATGAGAACACAGTTCATACCAATCATGTCTACTGGTAATGCATCTGTCAAGAATTCCTGT 28431 Query 13582 TCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT 13641 || || | ||||||||| ||| || | | || | || |||| ||| ||| Sbjct 28430 TCAATGGCCACAGCCTCTCTTACGATGCTTGTTATCTTTTCGTTAGTCGGACGATTGACC 28371 Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 13684 ||||||||||| |||| ||| |||||||| ||||||||||||| Sbjct 28370 AGATGTTTAAACATTAGACAAGCAAAATCGCAATGAAGGCCCT 28328 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||| | ||||||||| || || || || || |||||||| | || | |||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | |||||| || | ||| |||||||| || || |||||||| ||||||| |||||||| Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTT 13829 | | | ||||||||||| | ||| || Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTT 27999 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 |||||| ||||| || ||||| |||||||| || || | ||||| || || ||||| Sbjct 27759 AATGTAAGTATCGATGAGTAACGAGTACATTTCTGAATGCACATTTTCCATTGCAATCTG 27700 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAA 14048 || ||||||||||| | ||||| | ||||||||| | || ||||| | | Sbjct 27699 GAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTTCCACGAG 27640 Query 14049 GTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 ||||| || ||||| ||||| ||| |||||||| || Sbjct 27639 ATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGC 27601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478535580925440