Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4065 131 2e-25 seq2351 131 2e-25 seq361 89.7 7e-13 >seq4065 Length=69253 Score = 131 bits (144), Expect = 2e-25 Identities = 164/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||||| | ||| | ||| ||||| || || | || ||||| ||||| | ||||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 |||||||||| || || |||||||||||||| || || |||||||| |||| ||||| | Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 42207 CAATAAGTCTCTCTCCATAACCGGCACTGTCA--TG-TATCCACTTTTGAGCCCAATCGG 42263 ||| || | |||||| | || | ||| || ||||||| | ||||| | || Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTTATCACTTGCAATCCACTGCAGTGCCCAGTGGG 27967 Query 42264 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 | ||||| | |||||||||| || || | |||||||| || Sbjct 27966 CTTTCTTGCTCACACAAGGCAATGTCTCCACTGCATTAAACAG 27924 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTA-TACATTTCTGAATGAATGTTTTCAATGG 42383 |||||||| || |||||||| | | || | |||||||||||||| | ||||| || | Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTA-ACGAGTACATTTCTGAATGCACATTTTCCATTG 27707 Query 42384 CCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTT 42443 | ||||| || || || ||||| | || |||| | ||||| ||| | || | || Sbjct 27706 CAATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTT 27647 Query 42444 CAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 42498 | | | |||||||||||| || || || || |||||||| || | |||||| Sbjct 27646 CCACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 >seq2351 Length=162851 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 72772 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 |||||||||||||| || ||||| |||||||||||||| ||||| || |||||||||||| Sbjct 147490 TTTTTTGTTTCCTTATGAAGATTAGATACGGCTATTCTCGCGGCAAGTATGGCATAATCT 147431 Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891 || || | || || ||| |||||| |||||||||||| | | |||| || || ||| Sbjct 147430 GGGTGCTTCGTTGTCATAGTTGCTGCTGTTTCTGCTGCCAAATTATCCAGCTCAACAGTT 147371 Query 72892 GTTACTCCATTATATATTCCTTGGATAACCTT 72923 ||||| ||| ||||| || |||||| || Sbjct 147370 GTTACCCCAGAATATAAACCACTGATAACTTT 147339 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || ||||| || |||||| || |||| ||||| | ||| || ||||| || | Sbjct 160858 TCAAACTCTTCACCCCAACAATCAGCTAAGCCAGGGCTCTCACGGGGGCACATTAAACTC 160799 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062 || | |||| | || || ||||| || | ||||||||||||||| || ||| || Sbjct 160798 CAAACACCATTGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGC-ATAGAA 160740 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 ||||| | | ||| |||||| || ||||| |||||||| | ||| | ||| | | Sbjct 160739 GAGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAA 160680 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 |||||||||||||||||||||||||| ||||| Sbjct 160679 GATATCAGAATGCCACGGTTCCAAGTAAATGGC 160647 >seq361 Length=596180 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || || |||||||| || | || || | ||||||||| || || || ||||| | | Sbjct 1711 ACCTGGAATTCTCCTGAGAGGACCCTCCTAGTGTAAATGTTTGATGTGTATGGTTCGATT 1652 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 71254 |||||||| || |||||||||||||| || || || || ||||||||||||| Sbjct 1651 GACTCATTGTTCCCCAAAATTTGAGCTGTAGAAGCTGTGGGCATAGGTGCCA 1600 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| | ||||| ||||| || || || |||| |||| || ||||||||||| | Sbjct 7666 TCCAAGCATAAAAGTGCATGGAAGTAAGCTTCCCATAGTTAGGTTCAGCTATGTGAATGT 7607 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| ||||| || || || || || || || ||||||||| || || | | Sbjct 7606 TCAAAGACTGGCTTTGGTCAATAAATGCACCTCTATCCACAGCCATTTCAATTATACTTT 7547 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 71036 | ||||| |||||||||| ||| | || | | ||| | |||||||| Sbjct 7546 TCTGTGGGATTTCCCAAACAGTCCTGTAGAGTAACTTCAACTCTTCTGG 7498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671064569320960