Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2870 96.9 2e-15 seq3317 95.1 8e-15 >seq2870 Length=135571 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATA 33239 ||||||| |||||||| ||||| | || | || ||||||||||| ||| ||||| Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 33240 TTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTT 33299 | | | ||||| || | || || ||||| || || |||| ||| || ||| Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 33300 GAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGA 33359 ||| ||||| ||| | || ||||| || |||||||| ||||| || ||||| |||| Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 33360 AAATTTGCATGTT 33372 |||| ||||| || Sbjct 19770 AAATCTGCATTTT 19758 >seq3317 Length=93551 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATA 33239 |||| ||||| |||||||| |||||| | | | || || |||||||||||| ||| | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 33240 TTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTG 33296 |||| ||||| || || | || || |||||||| || || | ||| || || Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCC---TTAACAT 67105 Query 33297 TTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTA 33356 ||| ||| ||||| | || || || | ||| || || ||||| || |||||||| | Sbjct 67106 TTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCA 67165 Query 33357 CGAAAATTTGCATGTTT 33373 | || |||||||| ||| Sbjct 67166 CAAAGATTTGCATTTTT 67182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318743038132608