Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4065 98.7 9e-16 >seq4065 Length=69253 Score = 98.7 bits (108), Expect = 9e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||| |||||||| || | ||| |||||||||||||| | ||||||||| || || || Sbjct 27759 AATGTAAGTATCGATGAGTAACGAGTACATTTCTGAATGCACATTTTCCATTGCAATCTG 27700 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAA 13539 ||| ||||||||||| | || || | || || || || | || ||||| | | Sbjct 27699 GAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTTCCACGAG 27640 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTA 13583 |||||||| || || || || |||||||||||| ||||||| Sbjct 27639 ATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTA 27596 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 ||||||| | || || || || || || || | || ||||| || || | |||||| Sbjct 28144 TCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTTTA 28085 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | |||||| || | |||||| || || || ||||||||||||||||||| |||||||| Sbjct 28084 AGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACGCA 28025 Query 13295 ATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCT 13354 | | | ||| ||| | || || | ||| | ||||||| ||||||| ||| Sbjct 28024 ACAATGCGTTCTCCAAATGTTGCCTTATCACTTGCAATCCACTGCAGTGCCCAGTGGGCT 27965 Query 13355 TT 13356 || Sbjct 27964 TT 27963 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 13640 TTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATC 13699 || || | |||||| |||||||| |||||||| || || | ||||||||||||||| || Sbjct 27452 TTCGAAAGATCTACTTCCTCAACAGTCCAAAACGACGCTTCCGCCTTCTTATACATCTTC 27393 Query 13700 CATATATCCTTATAAACAATGGGAAACACAACGTATCTTCCAG 13742 |||||||| | ||| ||| ||||| | ||| ||| || || Sbjct 27392 CATATATCGTGATACTGAATAGGAAAAATGACGAATCGTCGAG 27350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430935672888192