Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2870 167 5e-36 seq664 154 3e-32 seq3317 136 9e-27 seq4065 131 4e-25 seq445 93.3 1e-13 >seq2870 Length=135571 Score = 167 bits (184), Expect = 5e-36 Identities = 162/207 (78%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 104358 GTAATGTAGATTC-TTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 ||||| || || | ||| |||||||| |||||||| || || | || ||||| | ||| Sbjct 19963 GTAATTTAAATACCTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGC 19904 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct 19903 TTCCCAGCAAATATAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTG 19844 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 ||||| |||||||| | || || || || || || || ||||| || ||||| || Sbjct 19843 GCTTTCACATTTTCAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTG 19784 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || || |||||||||||| Sbjct 19783 AGCGTTTTCACGAAAATCTGCATTTTG 19757 >seq664 Length=484775 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||||||||| || || || || |||| || ||||| || || ||||||||||||| Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | || |||||| ||||| || ||||| || || ||||||||||| || || ||||||| Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| ||| ||||| |||| || || ||||| ||||| | || || || | Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 104550 ATATCTGCAT 104559 | |||||||| Sbjct 440767 AGATCTGCAT 440758 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 |||||||| || || || |||||||| | ||| || |||| || |||||||||||||| Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 | | ||| || ||||| || || || || || ||||||||||| ||||| || || || Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551 | ||| || || ||||| || || || || ||||| || || || || || |||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 104552 ATCTGCAT 104559 |||||||| Sbjct 443874 ATCTGCAT 443867 >seq3317 Length=93551 Score = 136 bits (150), Expect = 9e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||||||||||||||| |||||||| || || || ||||| | || ||||| || |||| Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | ||||| || ||||| || || ||||| || ||||| || ||||| || ||||||| Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| || || | ||| || || || ||||||||||| || || | || || || | Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 104550 ATATCTGCAT 104559 | |||||||| Sbjct 55852 AGATCTGCAT 55861 Score = 136 bits (150), Expect = 9e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || || || || | ||||| | || |||| ||| ||||||||||||| Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 ||| | |||||||| ||||| || ||||||||||| ||||| || || || ||||||| Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | || || | ||| || |||| ||||| ||||| || || || ||||| |||| Sbjct 67109 CAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAA 67168 Query 104550 ATATCTGCATTTT 104562 | || |||||||| Sbjct 67169 AGATTTGCATTTT 67181 >seq4065 Length=69253 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 268820 TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGAT 268879 |||||| |||||| | ||| |||| || | ||||| |||||||| | | ||| Sbjct 27562 TTAAAAGAGGAAGAACGCCACTTTTTATCCCATGTACTTGCCTTTTTTGCTGCTTCAGAT 27621 Query 268880 GGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCC 268939 || || || ||||||||||| || || | |||| | ||||||||||| || || ||||| Sbjct 27622 GGCATTGTGAACGAAAATCTCGTGGAAAGGTTCAGCCAAGAGGTACAAATACCCGAAGCG 27681 Query 268940 AGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTA 268999 | |||||||| || |||||||| || || |||||| | |||||||| |||||| || Sbjct 27682 CGGTGTTTTTATGGCTTCCAGATTGCAATGGAAAATGTGCATTCAGAAATGTACTCGTTA 27741 Query 269000 TTAATAGATACTTATAT 269016 | || |||||||| || Sbjct 27742 CTCATCGATACTTACAT 27758 >seq445 Length=1857890 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || | |||||| | |||| |||||||||||| || || ||||| |||||||| ||| Sbjct 1798425 CCACCACGTAGCCTCAACACTAAATGTAATGTAGACTCCTTTTGAATGTTATAGTCTGAT 1798484 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||| | || ||||| || ||||||||||| || | | || ||||||||||| Sbjct 1798485 AGAGTCTTGTTATCCTCTAGCTGCTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGGG 1798544 Query 104453 ATTCCT 104458 || ||| Sbjct 1798545 ATACCT 1798550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151267163610368