Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3317 109 5e-19 >seq3317 Length=93551 Score = 109 bits (120), Expect = 5e-19 Identities = 142/193 (74%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 94818 CCTTT-TGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAA 94874 ||||| || | ||| |||||| || ||| | || |||||| | || ||||| ||| Sbjct 66988 CCTTTCTGTATGTTGTAATCGGACAAAGT--TCGATTATCCTCTAATTGCTTTCCAGCAA 67045 Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934 | ||||| | ||| ||||| ||||||||||||||||| || | |||||| ||||| || Sbjct 67046 AAATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACAT 67105 Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994 | | ||||||| ||||| || | || || || ||||| || |||||||||| Sbjct 67106 TTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCA 67165 Query 94995 CAAAGATCTGCAT 95007 ||||||| ||||| Sbjct 67166 CAAAGATTTGCAT 67178 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||| |||||| | || || ||||| ||||| || || || || ||||| || Sbjct 55706 ATCTTCCAACTGCTTTCCGGCGAAAATCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTT 55765 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||||||||| || | | ||||||| || || |||| ||| || Sbjct 55766 GTCCTGTATTTTTGCCTTCACATTTTCTATTGTGTCAGACGCTTCCACTTCAAGCGTAAT 55825 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || ||||| || | ||| ||||| ||||||||||| || Sbjct 55826 AGTCTTTCCCGTCAAAGTCTTCACGAAGATCTGCATCCT 55864 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 94873 AAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 |||||| | || ||||| || || ||||| ||||| ||||| | || || |||||||| Sbjct 53774 AAAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC 53833 Query 94933 GGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTT 94992 | | ||||||| | | || || || | ||||||||| || ||||| || || || Sbjct 53834 ATTCTCTATCGTGTCAGAGGGTTCCACCTCTAACGTGATGGTCTTGCCAGTGAGGGTCTT 53893 Query 94993 CACAAAGATCTGCAT 95007 ||| ||||||||||| Sbjct 53894 CACGAAGATCTGCAT 53908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448241350018560