Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq7518 102 2e-17 seq5745 96.9 7e-16 seq7117 84.2 4e-12 >seq7518 Length=30824 Score = 102 bits (112), Expect = 2e-17 Identities = 241/362 (67%), Gaps = 4/362 (1%) Strand=Plus/Plus Query 4342 GGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGAT 4401 || || || || || || || || | ||||| | ||| | ||||| |||| |||| Sbjct 18448 GGATATATTCTAGAGGTCGACCTCCTATATCCCCAAAATCTCCATGACTTACATTCAGAT 18507 Query 4402 CTACCTTTATGCCCAGAACATTTTGTACCACCTGGTAGCAAGCAACAAAAACTCACGACA 4461 |||| | || ||||| || || |||||| | || || ||||| ||| Sbjct 18508 TTACCACTCTGTCCAGAGAATAAGGTTCCACCTAACGGTAAACATGCCAAACTGCTAACA 18567 Query 4462 ACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAA--TGTTTAG 4519 || || | |||||| ||| || | ||||||||| ||| | || || | ||| | Sbjct 18568 ACGCTTGAAAATAAAACTAACTACATCATTCACTATGTTAATCTAAAGCAGGCTCTTTCG 18627 Query 4520 ATTTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGC 4579 | |||| | ||||| ||||| |||||| ||| | || ||||| |||||| ||| Sbjct 18628 CT--AGGTCTTGTTCTAAAGAAGATACACAGAGTAATAAAGTTTGATCAATCACCGTGGT 18685 Query 4580 TCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaa 4639 | ||| ||||| | ||||| | | | ||| | || ||||| || || | Sbjct 18686 TAAAAAAGTATATAGCCTTGAATACTGAGAGAAGGAAATTGGCAGTTAATGACTTTGAGA 18745 Query 4640 aaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAA 4699 | |||||||||| | ||||||||||| || ||||| ||||| |||||||||||| | | Sbjct 18746 AGGACTTTTATAAGCTCATGAATAATGCCGTATTTGGTAAGACTATGGAGAATGTAAGGA 18805 Query 4700 AA 4701 || Sbjct 18806 AA 18807 >seq5745 Length=36693 Score = 96.9 bits (106), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Minus Query 7165 AATCCTTTCCGATACCTACCACTCTTCAATTCACTGTCTTTATCTATTACCACAAATCCA 7224 |||||||||| ||| |||||| | |||| |||| || |||||||| |||| ||| ||| Sbjct 655 AATCCTTTCCTATATCTACCATTTTTCATGTCACAATCCTTATCTATCACCAGAAAACCA 596 Query 7225 TATTTATTCCAACATGCCGA----GCATAAATCTCTGAATGAGTTGTATGGCATGTCCGT 7280 ||||||| | || || || ||||| | ||| || ||| | | ||| ||||| Sbjct 595 TATTTATCAGACCA-GCAGAAATGGCATATTTTCTTGAGTGCATTGAAAGTCATATCCGT 537 Query 7281 ATTGACATGATCATCATAAATATGCTTCAGATT 7313 ||||||||||| ||||| | |||||||| ||| Sbjct 536 GTTGACATGATCTTCATATACATGCTTCAAATT 504 >seq7117 Length=43698 Score = 84.2 bits (92), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 4559 AATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAAC 4618 ||||||| || ||| | | ||| || ||||| || || || |||| | || ||| Sbjct 39459 AATTTGATCAGTCACAGTAGCTAAAGTCATACATAGACTTGAACACCGATCGACGTAAAT 39400 Query 4619 TAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAA 4678 |||| |||||||| || || |||||||||| |||| ||||| ||||||||||| | Sbjct 39399 GAGCTCTTAATGAGTTTGAGAAGGACTTTTATAAGCTAATTAATAACGCGGTTTTTGGTA 39340 Query 4679 AGACGATGGAGAATGT 4694 | || ||||||||||| Sbjct 39339 A-ACAATGGAGAATGT 39325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97964049984384