Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4065 140 4e-28 seq2351 120 4e-22 seq361 104 3e-17 >seq4065 Length=69253 Score = 140 bits (154), Expect = 4e-28 Identities = 166/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| |||| | ||| ||||| ||||| || || | || ||||| ||||| | ||||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 |||||||||| |||||||| ||||||||||| || || |||||||| |||| |||||| | Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCTGTCA--TG-TATCCACTTTTGAGCCCAATCGG 33502 ||| || | |||||| | || | ||| || ||||||| | ||||| | || Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTTATCACTTGCAATCCACTGCAGTGCCCAGTGGG 27967 Query 33503 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 | ||||| | |||||||||| || || | |||||||| || Sbjct 27966 CTTTCTTGCTCACACAAGGCAATGTCTCCACTGCATTAAACAG 27924 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTA-TACATTTCCGAATGAATGTTTTCAATGG 33622 |||||||| ||||||||||| | | || | |||||||| ||||| | ||||| || | Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTA-ACGAGTACATTTCTGAATGCACATTTTCCATTG 27707 Query 33623 CCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTT 33682 | ||||| || || || ||||| | || |||| || ||||| ||| | || | || Sbjct 27706 CAATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTT 27647 Query 33683 CCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33737 || | | |||||| ||||| || || || || |||||||| || | |||||| Sbjct 27646 CCACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 >seq2351 Length=162851 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 63966 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025 |||||||||||||| || ||||| |||||||||||||| ||||| || ||||||||||| Sbjct 147490 TTTTTTGTTTCCTTATGAAGATTAGATACGGCTATTCTCGCGGCAAGTATGGCATAATCT 147431 Query 64026 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64085 || || | || || ||| |||||| |||| ||||||| | | |||| || || ||| Sbjct 147430 GGGTGCTTCGTTGTCATAGTTGCTGCTGTTTCTGCTGCCAAATTATCCAGCTCAACAGTT 147371 Query 64086 GTTACTCCATTATATA 64101 ||||| ||| ||||| Sbjct 147370 GTTACCCCAGAATATA 147355 Score = 105 bits (116), Expect = 8e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||| || |||||| || | || ||||| | ||| || ||||| || | Sbjct 160858 TCAAACTCTTCACCCCAACAATCAGCTAAGCCAGGGCTCTCACGGGGGCACATTAAACTC 160799 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || | || | || || || ||||| || | ||||||||||||||| || ||| || Sbjct 160798 CAAACACCATTGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGC-ATAGAA 160740 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | | ||| ||||| || ||||| |||||||| | ||| | ||| | | Sbjct 160739 GAGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAA 160680 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63363 |||||||||||||||||||||||||| ||||| | | ||||||| Sbjct 160679 GATATCAGAATGCCACGGTTCCAAGTAAATGGCAAATGCACCAGGCC 160633 Score = 102 bits (112), Expect = 1e-16 Identities = 154/216 (71%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425 || |||||||| || |||| |||| ||||||||| ||||| |||| | ||| |||| Sbjct 158021 TTATTTCCTCCTTGGTCTACATATCGAGCGGTGTTGTTATACACTCGAAGCATAGGAACT 157962 Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTAC 63483 | ||| || || ||||||||||| || || || || || ||| | || | ||| | | Sbjct 157961 ACACCATTGGAAATACCATTGGTGCCAGATATGTAACTGCCAGTTGCTCTAATGCAGTGT 157902 Query 63484 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543 ||| || || || || || || || || | ||||| ||| | ||| |||| Sbjct 157901 ATATT--CAGCCCAATGCCTCCAGCAGACTTGGACACCAATGCACATTGCCTTAGTGTGT 157844 Query 63544 CATAGATACCCTCTATGCTATCATCGATCA-TGTTA 63578 ||||||||||||| ||||| ||||| ||| ||||| Sbjct 157843 CATAGATACCCTCAATGCTGTCATCTTTCATTGTTA 157808 >seq361 Length=596180 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 || ||| ||| || || || || || | ||| || || | ||||||||| || || || Sbjct 1365 GACCCTTTATAGGTTTCATAGGGACCGTACTTTTCTGCAAATTCACAACTTGCTTCCAAG 1306 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||||| || ||||| ||||| || |||||||| || | || | || || || ||| Sbjct 1305 GCACCATAGTAAATAGTTTCAAATATCTTCTTGTTCAAGTCCCGAGCACCCTCACTGTCA 1246 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 || || | | | | || || | ||| || || ||||||||||||||||| || ||| Sbjct 1245 AAAGGCAACCTCATTAAGATGAAAGTGTCAGCCAACCCTTGAACACCAATACCAATGGGT 1186 Query 62748 CTATGTCTCTTATTAGA 62764 ||||||||| |||| || Sbjct 1185 CTATGTCTCATATTTGA 1169 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || || |||||||| || | || |||| ||||||||| || || || ||||| | Sbjct 1711 ACCTGGAATTCTCCTGAGAGGACCCTCCTAGTGTAAATGTTTGATGTGTATGGTTCGATT 1652 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62448 |||||||| || |||||||||||||| || || || || ||||||||||||| Sbjct 1651 GACTCATTGTTCCCCAAAATTTGAGCTGTAGAAGCTGTGGGCATAGGTGCCA 1600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622877928271360