Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3317 114 9e-21 seq2870 84.2 1e-11 seq664 82.4 5e-11 >seq3317 Length=93551 Score = 114 bits (126), Expect = 9e-21 Identities = 143/195 (73%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || |||||||| |||||| || | || |||||||| ||||| ||||| Sbjct 66988 CCTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAA 67047 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 |||| |||||||||||||| || | |||||||| || |||||| ||| ||||| Sbjct 67048 ATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTT 67107 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | || || ||| |||||||| ||||| || || || |||| |||||||| Sbjct 67108 TCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACA 67167 Query 38307 AATATCTGCATGTTT 38321 || || ||||| ||| Sbjct 67168 AAGATTTGCATTTTT 67182 >seq2870 Length=135571 Score = 84.2 bits (92), Expect = 1e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 38130 TTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATT 38189 |||||||||||||| ||||| | || | || || ||||| || || |||||||| Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 38190 AGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGG 38249 || | || ||||| | || | ||||| || ||| ||| || |||||||| | Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCA 19829 Query 38250 ACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAAT 38309 | || || || ||||| | ||||| ||||||||||| | ||||||||||| Sbjct 19828 ATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAA 19769 Query 38310 ATCTGCATGTTTTACAAGCTC 38330 |||||||| ||| | | |||| Sbjct 19768 ATCTGCAT-TTTGAAAGGCTC 19749 >seq664 Length=484775 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 14/216 (6%) Strand=Plus/Minus Query 38112 AAATGAAGAGTGCTCTC-----CTTT-TGAATATTGTAATCAGACAAAACACGTTCG--- 38162 ||||||||||| | || |||| |||||||||||||| | || |||||| Sbjct 440969 AAATGAAGAGTATTATCACCACCTTTCTGAATATTGTAATCGG----AAAGCGTTCGGCC 440914 Query 38163 -TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | || ||||| ||||| || | || ||||| || | |||| || || || Sbjct 440913 ATCTTCGAGCTGCTTTCCAGCAAAAATCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTT 440854 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| ||| || ||| ||||| | | |||||| | || |||||||| || || Sbjct 440853 GTCCTGAATCTTGGCCTTGACATTTTCTATCGTATCTGAAGGCTCTACTTCTAAAGTTAT 440794 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || || ||||| |||||||| Sbjct 440793 GGTCTTCCCAGTCAAAGTCTTGACGAAGATCTGCAT 440758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334910885024576