Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq664 105 6e-18 seq3317 100 2e-16 seq2870 100 2e-16 seq346 93.3 4e-14 >seq664 Length=484775 Score = 105 bits (116), Expect = 6e-18 Identities = 141/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || |||| || | ||||| ||| | || Sbjct 440758 ATGCAGATCTTCGTCAAGACTTTGACTGGGAAGACCATAACTTTAGAAGTAGAGCCTTCA 440817 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | || || | ||| ||||| || || || |||||||| Sbjct 440818 GATACGATAGAAAATGTCA---AGGCCAAGATTCAG-GACAAGGAGGGAATCCCACCTGA 440873 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||||| | |||||||| || || || | ||||||| || || | |||||| Sbjct 440874 CCAACAGCGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACGCTTTCCGATTA 440933 Query 25175 CAATATTCAAAAAG 25188 ||||||||| |||| Sbjct 440934 CAATATTCAGAAAG 440947 >seq3317 Length=93551 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | || || | |||||||| ||||| Sbjct 55861 ATGCAGATCTTCGTGAAGACTTTGACGGGAAAGACTATTACGCTTGAAGTGGAAGCGTCT 55802 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| ||||| ||||| || || |||||||| Sbjct 55801 GACACAATAGAAAATGTGAAGGCAAAAATACAGGACAAGGAAGGCATCCCGCCTGACCAG 55742 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | ||||| ||||| || || || ||||||| | || | ||||| ||| Sbjct 55741 CAGAGATTGATTTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTATCTGATTATAAT 55682 Query 25179 ATTCAAAAAG 25188 ||||| |||| Sbjct 55681 ATTCAGAAAG 55672 >seq2870 Length=135571 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || |||||| | || || | ||||||||| | || Sbjct 19760 AATGCAGATTTTCGTGAAAACGCTCACGGGTAAAACGATTACCCTGGAAGTGGAGCCCTC 19819 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| || || |||| || || | ||| || || ||||| ||||| || || | Sbjct 19820 TGACACAATTGAAAATGTGAAAGCCAAGATTCAG-GATAAGGAAGGAATTCCTCCAGATC 19878 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||| ||||| || || ||||| ||||||| ||||| | || |||| Sbjct 19879 AGCAGAGGCTTATATTTGCTGGGAAGCAATTGGAAGATGGGCGCACGCTCTCTGACTACA 19938 Query 25177 ATATTCAAAAAG 25188 |||||||||||| Sbjct 19939 ATATTCAAAAAG 19950 >seq346 Length=1445323 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 51082 CACATACA-ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAG 51140 ||||||| ||| |||||| || ||||| |||||||| | | | ||| |||| || || Sbjct 1115656 CACATACTCACCAACATAACCATTTGGATCACGACCATCAAGGTTATAACGATCATTAAG 1115715 Query 51141 AAATATGGCATAACCCAATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGC 51200 | ||||||| | | || | || | || ||||| |||| |||||| || || Sbjct 1115716 GTAAATGGCATCGGCTAGAGCTACTTCAGGGCTCTCAGTCCACTCCAAAATTTTTTTAGC 1115775 Query 51201 CCAGTACATGCGCATGTAACCGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGA 51260 |||||||||||| | | |||| |||||||| || || |||||| |||||| || Sbjct 1115776 CCAGTACATGCGAAGGAAACCATGCATCTTCCCTTCCTTGACAAGCTGTATTTGAGCTGA 1115835 Query 51261 GTTCCACAATTCGTCGTGAGT 51281 |||||||| || || || || Sbjct 1115836 ATTCCACAAGTCATCATGGGT 1115856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433281018578240