Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3317 125 6e-24 seq2870 114 1e-20 seq664 111 1e-19 >seq3317 Length=93551 Score = 125 bits (138), Expect = 6e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| ||||| |||||| | || || || || | ||| | ||||| ||| | Sbjct 67182 AAAAATGCAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGAAGTCGAATC 67123 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || | || ||||||||||| || || |||||||| ||||| Sbjct 67122 ATCTGACACAATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGA 67063 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||||||| | || ||||| || || || ||||||||| | || || | |||||||| Sbjct 67062 TCAACAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAATCGAACTTTGTCCGATTA 67003 Query 22395 CAACATTCAAAAAG 22408 |||||| || |||| Sbjct 67002 CAACATACAGAAAG 66989 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 22194 GATATAGTTTTATAC--ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAA 22251 ||| || |||||| | |||| | |||||| || || || || ||||| || || || Sbjct 55888 GATTTATTTTTATTCGAATTTTCTAGGATGCAGATCTTCGTGAAGACTTTGACGGGAAAG 55829 Query 22252 ACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAA 22311 || | || |||||||||||| | | || || | || || | || |||||| || Sbjct 55828 ACTATTACGCTTGAAGTGGAAGCGTCTGACACAATAGAAAATGTGAAGGCAAAAATACAG 55769 Query 22312 GACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAG 22371 |||||||| || || || || || || || | | || || ||||| || ||||| || Sbjct 55768 GACAAGGAAGGCATCCCGCCTGACCAGCAGAGATTGATTTTCGCCGGAAAGCAGTTGGAA 55709 Query 22372 GATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 ||| | | ||| | || ||||| || ||||| |||| Sbjct 55708 GATGGCAGGACCCTATCTGATTATAATATTCAGAAAG 55672 >seq2870 Length=135571 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||| || ||||| | || ||||||||| | || || |||||||| || Sbjct 19758 AAAATGCAGATTTTCGTGAAAACGCTCACGGGTAAAACGATTACCCTGGAAGTGGAGCCC 19817 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | ||| || ||||| || ||||| || ||||| || ||| Sbjct 19818 TCTGACACAATTGAAAATGTGAAAGCCAAGATTCAGGATAAGGAAGGAATTCCTCCAGAT 19877 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | ||||||||||| || || || || || ||| ||||| |||| || ||| Sbjct 19878 CAGCAGAGGCTTATATTTGCTGGGAAGCAATTGGAAGATGGGCGCACGCTCTCTGACTAC 19937 Query 22396 AACATTCAAAAAG 22408 || |||||||||| Sbjct 19938 AATATTCAAAAAG 19950 >seq664 Length=484775 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | ||||| || || |||| || ||||| || || | Sbjct 443866 GATGCAGATATTTGTGAAGACGCTGACCGGAAAGACAATCACCCTGGAAGTAGAGCCCTC 443925 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | | ||| || ||||| ||||||||||| ||||| || || || Sbjct 443926 AGACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGGATTCCCCCTGACCA 443985 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||| | || ||||| || || |||||||||||| || || | ||||||||||| Sbjct 443986 GCAGCGTTTGATTTTTGCTGGAAAGCAGTTAGAGGATGGTCGTACTCTATCCGATTACAA 444045 Query 22398 CATTCAAAA 22406 |||||| || Sbjct 444046 CATTCAGAA 444054 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || ||||| || || || || | ||| | ||||| || | | Sbjct 440757 GATGCAGATCTTCGTCAAGACTTTGACTGGGAAGACCATAACTTTAGAAGTAGAGCCTTC 440816 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || |||| || ||||| ||||||||||| || ||||| || || Sbjct 440817 AGATACGATAGAAAATGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCTGACCA 440876 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| || | || ||||| || || ||| | || ||| ||| || | ||||||||||| Sbjct 440877 ACAGCGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACGCTTTCCGATTACAA 440936 Query 22398 CATTCAAAAAG 22408 ||||| |||| Sbjct 440937 TATTCAGAAAG 440947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419682493090240