Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq259 96.9 7e-15 seq501 89.7 1e-12 seq1921 86.0 1e-11 seq575 86.0 1e-11 seq1431 84.2 4e-11 >seq259 Length=578514 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 || |||| |||||||||| ||||||| | ||||||||||||| | ||||||||||||||| Sbjct 182969 AGTCCGGCTAGCTCAGTCAGTAGAGCACGAGACTCTTAATCTCGAGGTCGTGGGTTCGAG 183028 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 183029 CCCCACATTGGGC 183041 >seq501 Length=773132 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 |||||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||| Sbjct 689834 CATGTCCCTGTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCG 689775 Query 142110 ACCCCCG 142116 | |||| Sbjct 689774 AATCCCG 689768 >seq1921 Length=289896 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| ||||||||||||||| || ||||||||||||| |||||||||||||||| Sbjct 49831 GCCCGGCTAGCTCAGTCGGTAGCGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 49772 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 49771 CCCACGTTGGGC 49760 >seq575 Length=417346 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 142499 AGATA-GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGT 142557 ||||| || |||||||| ||||||||||||| ||||||||||||| |||||||||| Sbjct 142147 AGATATGCACGGTTAGCACAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT 142206 Query 142558 TCGAGCCCCACATCGGGCA 142576 | ||||||||| | ||||| Sbjct 142207 TTGAGCCCCACGTTGGGCA 142225 >seq1431 Length=362955 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||| Sbjct 42873 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGAAT 42814 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 42813 CCCGGCAGGGA 42803 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||| Sbjct 162971 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGAAT 163030 Query 142113 CCCGCCAGAGACGC 142126 |||| ||| || || Sbjct 163031 CCCGGCAGGGATGC 163044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027719647161536