Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq664 150 3e-31 seq3317 149 1e-30 seq2324 96.9 6e-15 >seq664 Length=484775 Score = 150 bits (166), Expect = 3e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| |||||||| || || | ||||| ||||||||||| || || || || Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | || ||||| || ||||| || |||||||| |||||||| || || ||| ||| Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||||| | |||||||||| |||||| || ||||| || || ||||| || ||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 443874 ATCTGCAT 443867 Score = 131 bits (144), Expect = 3e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| || || || |||||||| || || | |||||||| | |||||| || || || | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | | |||||||| ||||| || || |||||||| |||||||| |||||||| | Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || || |||| | |||||||| || || ||||| || || || | |||||||||| Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 68452 ATATCTGCAT 68461 | |||||||| Sbjct 440767 AGATCTGCAT 440758 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| |||||||| || || ||| ||| |||||||||| | || |||||| Sbjct 443626 CCTTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCTGAGGGCTCAACTTCC 443567 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| ||||| ||||| ||||||||||| || ||||||||||| Sbjct 443566 AGGGTTATGGTCTTTCCGGTGAGGGTCTTCACAAATATCTGCAT 443523 >seq3317 Length=93551 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| || || |||||||| || || ||||| |||||||| |||||||| |||||||| | Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | ||| || ||||| || || |||||||||||||| || || |||||||| || | Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 | || ||||| | | ||| ||||| | || || || |||||||| | ||||| |||| Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 68452 ATATCTGCAT 68461 | |||||||| Sbjct 55852 AGATCTGCAT 55861 Score = 120 bits (132), Expect = 6e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || ||||||| || ||||| || ||||||||||||||||| || ||||| |||||||| Sbjct 53775 AAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 53834 Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 ||| || ||||| | | ||| || || || |||||||| || || ||||||||||| Sbjct 53835 TTCTCTATCGTGTCAGAGGGTTCCACCTCTAACGTGATGGTCTTGCCAGTGAGGGTCTTC 53894 Query 68448 ACGAATATCTGCAT 68461 ||||| |||||||| Sbjct 53895 ACGAAGATCTGCAT 53908 Score = 107 bits (118), Expect = 4e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || ||||||| || ||||| || ||||||||||||||||| || ||||| ||||| || Sbjct 54147 AAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 54206 Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 ||| || ||||| | | ||| || || || ||||| || || || || |||||||| Sbjct 54207 TTCTCTATTGTGTCAGAGGGTTCCACCTCTAACGTGATAGTCTTGCCGGTAAGGGTCTTA 54266 Query 68448 ACGAATATCTGCAT 68461 ||||| |||||||| Sbjct 54267 ACGAAGATCTGCAT 54280 >seq2324 Length=154568 Score = 96.9 bits (106), Expect = 6e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 268502 TACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTT-TGAGGGATTTCTCGGACTTTGCC 268560 || ||||| || |||| || || || || ||||| ||||| ||||| | ||||| || Sbjct 82486 TATGGAGATCGAGGATAAAACGGTGTTGTT-TCTTTCTGAGGTATTTCATGAACTTTTCC 82544 Query 268561 AAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCG 268620 | | || || || || ||||||||||| || || | ||||||| | || ||| |||| Sbjct 82545 ATACAGTTCTGATGTTGATGCTTGGTAAAATTTGACTTTTTTTTCCAAGCCACAGGTTCG 82604 Query 268621 GATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCAT 268680 ||| || || ||||| || |||||||| | | |||| || || || || || || || Sbjct 82605 GATAGCATCCAGCAACCGCAGAGTTCCTAGGGCATCAACTTCAGCAGTGTATTCACTCAA 82664 Query 268681 CTCGAATGACACCTG 268695 || ||||| | ||| Sbjct 82665 ATCAAATGAAATCTG 82679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921519915589120