Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq664 105 6e-18 seq3317 104 2e-17 seq2870 95.1 1e-14 >seq664 Length=484775 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || ||||||||||||||| | ||||||| ||| || | || || ||||| | || Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | |||||| ||||| || ||||| || || ||||| |||||| ||| | | ||| Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | |||||| | || || || |||| ||| | || || |||||||| || || ||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 114375 ATCTGCAT 114382 |||||||| Sbjct 443874 ATCTGCAT 443867 >seq3317 Length=93551 Score = 104 bits (114), Expect = 2e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||||||| || ||| ||| ||| || | ||| || ||||| | | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGT 114311 | | || ||||| || |||||||| |||||||| || ||| ||| | ||| | | | Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAAT-TTTAGCCTTAACATTT 67107 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||||| | |||||||| || | || | || || || ||||||||||| ||| Sbjct 67108 TCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACA 67167 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 67168 AAGATTTGCAT 67178 >seq2870 Length=135571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||||||||| ||||| || | || || |||||| | ||| || ||||| | | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | || | ||| || || |||||||| ||||| || || |||||| ||| | | || Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 ||| ||||| | || || || |||| ||| | |||||| || || || ||||| || | Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 114373 AAATCTGCAT 114382 |||||||||| Sbjct 19770 AAATCTGCAT 19761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420088849028352