Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq664 129 1e-24 seq407 93.3 1e-13 seq3317 84.2 5e-11 >seq664 Length=484775 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| || ||||| || |||| ||||| || || ||||| | || ||||| || || | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| |||||||| | ||||||||| || || ||||| || || || || || |||| Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 |||| | ||| | |||||||| | || || |||||||| |||| ||||||||||| Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 288464 ATATCTGCATTATGTTATT 288482 | |||||||| ||| ||| Sbjct 440767 AGATCTGCATCCTGTAATT 440749 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || || || || |||| || || || || || ||||| || ||||| || || ||| Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 | |||||| || | || || || || || ||||| || || ||||||||||| || Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465 || | || | |||||||| || ||||| ||||| |||||||| ||||| || ||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 288466 ATCTGCAT 288473 |||||||| Sbjct 443874 ATCTGCAT 443867 >seq407 Length=487326 Score = 93.3 bits (102), Expect = 1e-13 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 325342 ATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTT 325401 ||| |||||||| |||||||||||||| || ||||| || |||| | || ||||| Sbjct 408060 ATCTTTACCACCTTGCAATCTCGAACCAAATTGGCCAATGGGTTGCAACAAATTTATGTT 408119 Query 325402 ATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCC 325461 ||| || || ||| ||| ||||| | || | ||| || ||||| |||| || Sbjct 408120 ATTACTACCAACAAAATTTTGTGCCAAATTAATGATTGTAGACATAAGAGAAACTTCACC 408179 Query 325462 ATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTT 325512 |||||||||||| || ||||| || ||||| ||||||||||| || Sbjct 408180 ATGGTGATAGGCAGAGTGTTCTGCCACTGAACCGGCCAACTGTGCAACTTT 408230 >seq3317 Length=93551 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 || |||||||| ||||| || || || | || |||||| || || ||||||||| Sbjct 67024 TCCTCTAATTGCTTTCCAGCAAAAATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTA 67083 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || || ||||| || || || ||||| || | || ||||| ||||| | || || Sbjct 67084 TCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATT 67143 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || |||||||| || || || || |||||| Sbjct 67144 GTCTTTCCTGTCAGAGTTTTCACAAAGATTTGCATT 67179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179519942991488