Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2870 113 5e-20 seq3317 105 7e-18 >seq2870 Length=135571 Score = 113 bits (124), Expect = 5e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||||||||| ||||| || | || |||||| | ||||| | ||||| || ||| | | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372 | |||| |||||| || |||||||||||||| || || || | | || ||||| ||| Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTG-AATCTTGGCTTTCACATTT 19832 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| ||| || |||||||| | || | || || || || | ||||| ||| Sbjct 19831 TCAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACG 19772 Query 64433 AAAATTTGCATTTT 64446 ||||| |||||||| Sbjct 19771 AAAATCTGCATTTT 19758 >seq3317 Length=93551 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || ||||||||||| | | || || || || | ||||| || ||| ||| Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | || || || ||||||||||| |||||||| ||||| ||||| ||| ||| | Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | ||| ||| | || ||||||| ||| | ||||| || |||| |||||| || | Sbjct 67109 CAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAA 67168 Query 64434 AAATTTGCATTTT 64446 | ||||||||||| Sbjct 67169 AGATTTGCATTTT 67181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499589239498240