Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq7474 86.0 5e-12 seq2355 86.0 5e-12 >seq7474 Length=47166 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 108873 GGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTA 108932 ||||| | || | || |||||||| ||||||||||||||||||| |||||||||||||| Sbjct 44608 GGCGGAGGTGACCCTGGGCGAGGGGTGGCACAACTACCACCACGCCTTCCCCTACGACTA 44549 Query 108933 CAAGGCCGCCGAGTTGGGGAAC 108954 | ||| || ||||| ||| || Sbjct 44548 CCGGGCGGCGGAGTTCGGGCAC 44527 >seq2355 Length=205517 Score = 86.0 bits (94), Expect = 5e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 ||| ||||||| || |||||||||||||| ||||| ||||| | ||||||||||| ||| Sbjct 104982 GCTTTCGGCGAAGGCTGGCACAACTACCATCACGTCTTCCCATGGGACTACAAGGCGGCC 104923 Query 108943 GAGTTGGGGAACGAC 108957 |||||||| ||| || Sbjct 104922 GAGTTGGGCAACTAC 104908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381731408193024