Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3317 89.7 5e-13 >seq3317 Length=93551 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/209 (71%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 138410 AATGTATGTTTGACT--CCTTT-TGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGA 138466 ||| ||| ||| ||| ||||| || |||||||| ||| || ||| || ||||| | Sbjct 66971 AATTTATATTTTACTAACCTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTA 67030 Query 138467 GTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGA 138526 ||| || || | | | |||| || ||||| || ||||| ||||||||||| || ||| Sbjct 67031 ATTGCTTTCCAGCAAAAATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATC-TTGA 67089 Query 138527 TTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 |||| | |||| | ||| | ||||| | || || || || | || | || || Sbjct 67090 ATTTTAGCCTTAACATTTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTT 67149 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||||||||| ||||| || ||||| Sbjct 67150 CCTGTCAGAGTTTTCACAAAGATTTGCAT 67178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496207215621120