Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3317 107 2e-18 >seq3317 Length=93551 Score = 107 bits (118), Expect = 2e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| || || || |||||| | ||| | ||| || ||||| ||||| || | Sbjct 66988 CCTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAA 67047 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || || ||||| || || || ||||| |||||||||||||||||||| || | | Sbjct 67048 ATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTT 67107 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| || || |||||||| | ||||| || || || || |||||||| ||| Sbjct 67108 TCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACA 67167 Query 45330 AAAATTTGCAT 45340 || |||||||| Sbjct 67168 AAGATTTGCAT 67178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 45151 CCTTT-TGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| || ||||||||||| | ||| | ||| ||||| || ||||| ||| | Sbjct 55671 CCTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAA 55730 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||||| |||||||| ||||| |||||||| || || || |||||| || | | Sbjct 55731 ATCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTT 55790 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| ||||| || | || ||||| || |||| || || || || | ||| || || Sbjct 55791 TCTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACG 55850 Query 45330 AAAATTTGCATC 45341 || || |||||| Sbjct 55851 AAGATCTGCATC 55862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451952937244160