Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2870 105 2e-17 seq664 98.7 2e-15 seq3317 93.3 1e-13 >seq2870 Length=135571 Score = 105 bits (116), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||| | |||||||||| | || | |||||||||| ||||| || || || || Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561 || | |||||| || ||| ||||||||| ||||||||||| ||||| ||| Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCA 19829 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | ||||| | | || || |||| || ||||| ||||||||||| |||||||| ||| Sbjct 19828 ATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAA 19769 Query 199622 ATTTGGTACATTTT 199635 || || |||||| Sbjct 19768 ATCTG---CATTTT 19758 >seq664 Length=484775 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| || | |||||| || | | ||| | ||||| || | ||||||||| || || | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | |||||||||||| || ||| || || ||||||||||| |||||| | Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCT 443937 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 | | |||||||| | ||||| |||| ||||| ||||| || || || || ||||||| Sbjct 443936 CAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAA 443877 Query 199620 AAATTTG 199626 | || || Sbjct 443876 ATATCTG 443870 >seq3317 Length=93551 Score = 93.3 bits (102), Expect = 1e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 199466 GTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATT 199525 ||||| |||||||||| ||||||||||||||| || | | ||||||||| || || Sbjct 55698 GTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAATCAATCTCTGCTGGTCAGGCGGGATG 55757 Query 199526 CCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCC 199585 ||||| ||||| || ||| |||||| ||| | ||||| | | ||| || || Sbjct 55758 CCTTCCTTGTCCTGTATTTTTGCCTTCACATTTTCTATTGTGTCAGACGCTTCCACTTCA 55817 Query 199586 AACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||| ||||| | ||| ||||| || || || Sbjct 55818 AGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGAAGATCTG 55858 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| || | |||||| || | |||||| | ||| || | |||||||| || || Sbjct 66988 CCTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAA 67047 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | || || || || ||| ||| |||||| || ||||| || ||| || | Sbjct 67048 ATTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTT 67107 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| | || ||| || || || || || ||||| || || |||||||||||| Sbjct 67108 TCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACA 67167 Query 199619 AAAATTTGGTACATTTTAGCCTTA 199642 || ||||| |||||| || ||| Sbjct 67168 AAGATTTG---CATTTTTGCTTTA 67188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178787226516032