Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4065 132 5e-26 seq361 109 6e-19 seq2351 91.5 2e-13 >seq4065 Length=69253 Score = 132 bits (146), Expect = 5e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| |||| | || | |||||| || || || || || ||||| || || || |||| Sbjct 28146 CCTCATCTCGAGAAATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTT 28087 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||| || || ||||||||||||||||| || ||||| ||||| |||| ||||| | Sbjct 28086 TAAGCCAAAAGATGGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACG 28027 Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162 |||| | | ||||||| | | || | || | | |||||| | ||||||||| | | Sbjct 28026 CAACAATGCGTTCTCCAAATGTTGCCTTATCACTTGCAATCCACTGCAGTGCCCAGTGGG 27967 Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205 | ||||| | ||||| |||| |||||| | | |||||| || Sbjct 27966 CTTTCTTGCTCACACAAGGCAATGTCTCCACTGCATTAAACAG 27924 Score = 107 bits (118), Expect = 2e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 |||||||| || | ||| || | ||| ||||||||||||||| | |||||| || || Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTAACGAGTACATTTCTGAATGCACATTTTCCATTGC 27706 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTC 19343 ||||| || || |||||||| | ||||| | ||| ||||| || | || ||||| Sbjct 27705 AATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTTC 27646 Query 19344 GACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATG 19397 || | |||||| || || || ||||| ||| |||||||| || | |||||| Sbjct 27645 CACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 Score = 105 bits (116), Expect = 8e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 19431 ATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC 19490 |||| ||| |||||| ||| || | ||||||||| ||||| |||||||| || || || Sbjct 27470 ATTCGCATCTTTAATACCTTC-GAAAGATCTACTTCCTCAACAGTCCAAAACGACGCTTC 27412 Query 19491 TGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATT 19550 || || |||||||| ||||||||||| |||| || |||||||| || || |||| Sbjct 27411 CGCCTTCTTATACATCTTCCATATATCGTGATACTGAATAGGAAAAATGACGAATCGTCG 27352 Query 19551 TTTATTTTCTTTAAGAATAGGTTCCATTTT 19580 ||||||||||| | ||||| |||||| Sbjct 27351 AGGGTTTTCTTTAAGCAAAGGTT-CATTTT 27323 >seq361 Length=596180 Score = 109 bits (120), Expect = 6e-19 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 47541 CCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCA 47600 ||||| || | || || || ||||| |||| ||| |||||||| || || | |||| Sbjct 1380 CCTTTGCTGACAGGGGACCCTTTATAGGTTTCATAGGGACCGTACTTTTCTGCAAATTCA 1321 Query 47601 CAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT 47660 |||||||||||||| |||| ||| || || ||||||||||| || |||| | | || Sbjct 1320 CAACTTGCTTCCAAGGCACCATAGTAAATAGTTTCAAATATCTTCTTGTTCAAGTCCCGA 1261 Query 47661 GC-TTCTGA-TGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAA 47718 || || | || |||||||| | || || || ||||| ||||||| Sbjct 1260 GCACCCTCACTG--TCAAAAGGCAACCTCATTAAGATGAAAGTGTCAGCCAACCCTTGAA 1203 Query 47719 CACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACT 47757 ||||||||||||| |||||||| | |||| || |||| Sbjct 1202 CACCAATACCAATGGGTCTATGTCTCATATTTGACAACT 1164 >seq2351 Length=162851 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413 ||||| |||||||| |||| ||||| || || |||||||| |||| | ||| || || Sbjct 158021 TTATTTCCTCCTTGGTCTACATATCGAGCGGTGTTGTTATACACTCGAAGCATAGGAACT 157962 Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT 48466 | |||||| || ||||||||||| || || || ||||| ||| | ||||| || Sbjct 157961 ACACCATTGGAAATACCATTGGTGCCAGATATGTAACTGCCAGTTGCTCTAAT 157909 Score = 89.7 bits (98), Expect = 6e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 48927 TTTTTTGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCT 48986 ||||||||||| |||||||||||||||| | |||||| || || | ||| ||||||||| Sbjct 147490 TTTTTTGTTTCCTTATGAAGATTAGATACGGCTATTCTCGCGGCAAGTATGGCATAATCT 147431 Query 48987 GGATGAATTGTTGTACAT-GTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGT 49045 || || | ||||| ||| || | | |||||||||| || |||| | || ||| Sbjct 147430 GGGTGCTTCGTTGT-CATAGTTGCTGCTGTTTCTGCTGCCAAATTATCCAGCTCAACAGT 147372 Query 49046 AGTTACACCTGTATATATTCCTTGAATAACTTT 49078 ||||| || | ||||| || |||||||| Sbjct 147371 TGTTACCCCAGAATATAAACCACTGATAACTTT 147339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562046293501440