Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2751 210 2e-48 seq2870 122 7e-22 seq3317 107 2e-17 seq407 98.7 8e-15 seq2674 91.5 1e-12 seq924 86.0 5e-11 >seq2751 Length=137355 Score = 210 bits (232), Expect = 2e-48 Identities = 535/807 (66%), Gaps = 14/807 (2%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 ||||| | ||| | || || || || || |||||||| |||| | || | |||| Sbjct 70182 GGAGACACCCATTTGGGAGGTGAGGACTTCGATAATAGGATGGTCAACCAC--TTTGTTC 70239 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA---AGCTCTTCGTC 551904 |||| || || | || |||| ||||| |||| | ||| ||| || | | Sbjct 70240 AAGAATTCAAGAGGAAGTACAAGAAGGATCT---TACACCAAACAAGAGAGCAGTTAGAC 70296 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | || ||||| ||||| || || || || || | || || ||| || || | | | Sbjct 70297 GACTGAGAACAGCTTGTGAGAGGGCAAAGCGTACCCTGTCTTCTTCCACCCAGGCTAGCA 70356 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||| | || ||||| ||||| || ||||| | | | || | || | ||||| | | Sbjct 70357 TTGAAATTGACTCATTGTTTGAAGGGATTGACTTTTACACATCCATCACCAGGGCTAGGT 70416 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAA 552084 |||| || || | | ||||| ||| | | || |||||||||| || || || | Sbjct 70417 TTGAGGAGCTTAATGCAGATCTGTTTCGTAGTACCCTTGAACCAGTTGAGAAATCCTTGA 70476 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 ||||| | || || || || || | | ||||| || || | ||||| || || || Sbjct 70477 GAGATGCGAAAATGGACAAGTCTCAGATTCATGACATCGTTTTAGTTGGGGGTTCCACGC 70536 Query 552145 GAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | |||||||| |||| | | || ||| ||| ||||||||| || | || ||| | Sbjct 70537 GTATTCCTAAGATTCAAAAGCTTTTGCAAGA-CTT-TTTCAATGGAAAGGAGTTGAATAA 70594 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | || || ||||| ||||| || ||||| || || | ||||| || || || Sbjct 70595 GTCTATCAACCCTGATGAAGCTGTGGCTTATGGAGCTGCTGTGCAAGCTGCCATCCTACA 70654 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 |||| | | ||| | || | || | || | |||||||||||| |||| | Sbjct 70655 TGGAGATAAGTCTGAGGCTGTGCAGGACCTTCTGCTGCTTGATGTTACTCCTTTATCCTT 70714 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | || |||| ||| || | |||||| || ||| | | || ||||| ||||| Sbjct 70715 GGGTATTGAGACAGCTGGTGGAGTGATGACTGCCCTAATCAAGCGTAACACTACCATTCC 70774 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 ||| || | | || | || || |||||||| || ||| ||| || || Sbjct 70775 AACTAAGCAAACCCAAACTTTCACAACATACTCAGATAACCAGCCTGGTGTGTTGATCCA 70834 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | | | ||||||||| | | | || ||||| || |||| | | || | || | | Sbjct 70835 AGTGTATGAAGGAGAGCGTACCATGACCAAAGACAACAATCTATTGGGAAAATTCGAGCT 70894 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 | || ||||||||||||||||||||||| || |||||||||||||| || ||||| || Sbjct 70895 AACTGGCATTCCTCCTGCTCCTCGTGGAGTCCCTCAAATTGAAGTTACCTTTGATATTGA 70954 Query 552563 TGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||||| || ||||||||||||| Sbjct 70955 TGCCAATGGTATCCTGAATGTGACTGC 70981 Score = 127 bits (140), Expect = 2e-23 Identities = 246/358 (69%), Gaps = 4/358 (1%) Strand=Plus/Plus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| || || | ||||| |||| ||| | ||| | | || || | ||||||||| Sbjct 69075 GATGCAAAGCGGCTCATTGGTCGAAGATTTGAAGATGCTTCGGTCCAATCTGATATGAAG 69134 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTACTCATGA 550299 |||||||| ||| | | |||| || | |||||||| | || || | | | | | Sbjct 69135 CATTGGCCATTCACAGTAGTTAGTGATGGCGGAAAACCAAAGATCCAAATCCAGT-ACAA 69193 Query 550300 AGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAA 550359 |||| ||| |||| || ||| | || ||||||||||| ||| |||||||| Sbjct 69194 AGGAGAAACCAAAACTTTTTACCCCGAAGAGATATCATCTATGGTGCTAACCAAAATGAA 69253 Query 550360 ACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAG 550418 |||| ||| || | | || |||| || | |||| || | || ||||| | Sbjct 69254 GGAAACCGCCGAGGCATACCTAGG-AAAGACCGTCTCTAATGCTGTTGTCACAGTACCCG 69312 Query 550419 CATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTA 550478 ||||||| |||||||| || || ||||| || || ||| |||| || ||||| || | Sbjct 69313 CATATTTCAATGACTCGCAGCGACAAGCCACCAAGGATTCTGGGGCGATAGCTGGCCTGA 69372 Query 550479 ATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | |||||||| |||||||| || || || ||||| || |||| || ||| | ||||| Sbjct 69373 ACGTTCTTCGAATTATCAACGAGCCCACGGCTGCAGCCATTGCTTACGGATTGGATAA 69430 >seq2870 Length=135571 Score = 122 bits (134), Expect = 7e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || || | |||||| | ||| || || ||||| ||||| || Sbjct 19943 AATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATAAGCCT 19884 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||| |||||||||||||| ||||| ||||| || ||| || |||||||| Sbjct 19883 CTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCAATTGT 19824 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| | | | || ||| || |||| |||||||| || || ||||| |||||||| | Sbjct 19823 GTCAGAG-GGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAAATCT 19765 Query 563471 GCAT 563474 |||| Sbjct 19764 GCAT 19761 >seq3317 Length=93551 Score = 107 bits (118), Expect = 2e-17 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | | ||||| ||| || | ||| ||||| |||||||| | | | Sbjct 66997 ATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAATTAAGCGT 67056 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct 67057 TGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCAATTGTG 67116 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| ||| | | ||| | ||||| || || || || |||||||| || || ||||| Sbjct 67117 TCAG-ATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAAAGATTTG 67175 Query 563472 CAT 563474 ||| Sbjct 67176 CAT 67178 >seq407 Length=487326 Score = 98.7 bits (108), Expect = 8e-15 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314 ||||||||||| || | ||| || | ||||||||| ||| || ||| | |||||||| Sbjct 408034 GTAAAGATATACCTGGGGCTGGCAGCATCTTTACCACCTTGCAATCTCGAACCAAATTGG 408093 Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374 ||| | || ||| ||||| || |||||||| || ||| ||||||| |||| ||||| Sbjct 408094 CCAATGGGTTGCAACAAATTTATGTTATTACTACCAACAAAATTTTGTGCCAAATTAATG 408153 Query 428375 ATGGTACTAGTTAAG-GATTGTTCACCATGATGATA 428409 || ||| | |||| || ||||||||| ||||| Sbjct 408154 ATTGTA-GACATAAGAGAAACTTCACCATGGTGATA 408188 Score = 93.3 bits (102), Expect = 3e-13 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 430242 ATATATTCGCTAA-TTTTGCTCCGAATCCATTTTTACCACCAACAAtttttttttCACCT 430300 ||||||| || || ||||||||| | |||||| |||| ||| | ||| ||| | Sbjct 431988 ATATATT-GCAAAGTTTTGCTCCATAACCATTTCTACCTCCAGTCACCTTTGCTTCTTCG 432046 Query 430301 TTATCATAATTAGTGGATGTTAATAGTTCTCCAAAAATCATCGATGGTACCATGATTTTA 430360 | || |||||||| |||||||| || | ||||||||||| | ||| || | ||||| Sbjct 432047 TCATTATAATTAGAAGATGTTAACAGGTGGCCAAAAATCATGGTTGGAACAAACATTTTC 432106 Query 430361 TGTTCTTTATGCTCGACGACATCAATACCATCACCATTATTCCAAACA 430408 | ||||||||||| || ||| || || | ||||||||||| ||| Sbjct 432107 TCATCTTTATGCTCCACTACAGGTATTCCTTTTCCATTATTCCACACA 432154 >seq2674 Length=435537 Score = 91.5 bits (100), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| | ||||| || |||||||| ||||| | || |||||||| || || |||| Sbjct 365954 ATGCAGTTGTCACTGTTCCTGCATATTTCAATGATGCTCAGCGTCAAGCAACAAAGGATG 366013 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| ||| |||| || | ||| | | || || ||||| || ||||||||||| Sbjct 366014 CTGGTACCATTTCTGGTCTCCAAGTTATGAGAATCATTAATGAGCCCACTGCTGCTGCCA 366073 Query 550518 TTGCATATGGACTTG 550532 |||||||||| |||| Sbjct 366074 TTGCATATGG-CTTG 366087 >seq924 Length=796004 Score = 86.0 bits (94), Expect = 5e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTC 552554 |||| | ||| |||||||| |||||||||||||| || || |||||||||||||| || Sbjct 545688 TTTACTCTAGTTGGTATTCCACCTGCTCCTCGTGGTGTTCCCCAAATTGAAGTTACATTT 545747 Query 552555 GATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || ||||| ||||| ||| | | ||| |||| Sbjct 545748 GACATTGATGCTAATGGTATTGTCCACGTGTCTGC 545782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028825539399040