Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq867 111 1e-19 >seq867 Length=826539 Score = 111 bits (122), Expect = 1e-19 Identities = 236/342 (69%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 29875 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 29934 |||| |||||| ||||| || || || |||| ||||| || ||||| || || || || Sbjct 762790 GTGATGTGAGCAATCATATATGTCAGCAGAGCATAGCTTGCAATGTTGAATGGGACACCA 762849 Query 29935 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGT-CGCTCACGTA 29993 || ||||| || | || ||||| || | ||| || || | ||| || | ||| || || Sbjct 762850 AGTCCCATATCAGCAGATCTCTGATACAACTGGCATGACAACTCACCATTCGCA-ACATA 762908 Query 29994 AAACTGACACATGGT-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCC 30052 |||||| ||| || ||||||||| ||||| ||||| | | ||| || |||| Sbjct 762909 AAACTGT-ACAAGGCAGTGGCACGGGGGAAGTGCCATTCGTGGTATGTCAACAGGATTCC 762967 Query 30053 AGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTT 30112 | ||||||| || || | || || | ||| || | | || || | || || | Sbjct 762968 AAGCGCACATCATTATCCTTCTATCATTTGGATTTGTACGTAT-AGTTTCAATTACTTGT 763026 Query 30113 GCA-GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT-CATGTCCGTGTACTCTGCTCC 30170 ||| | || ||||| ||| || || |||| || | | ||| || | || | |||||| Sbjct 763027 GCAAGTTGGTCCACACCCTCTCCAGAATAGT-TGTCATGCATCCCCCTATATTTTGCTCC 763085 Query 30171 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30212 ||||||||||| || || || ||||| || |||| ||| || Sbjct 763086 AAAATGCCTCCATTGAAAACCATACACAGGGCCCAAGTCACC 763127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408573297679808