Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3317 145 6e-30 seq2870 131 1e-25 seq664 105 5e-18 >seq3317 Length=93551 Score = 145 bits (160), Expect = 6e-30 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| ||||| |||||||||| | ||||| ||| || |||||||| || ||||| | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | || || ||||||||||| ||||| |||||||||||||||||||| || ||| ||| Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||||||| | ||| ||||| | ||| | || || || || | |||||| |||| Sbjct 67109 CAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAA 67168 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 67169 AGATTTGCAT 67178 Score = 136 bits (150), Expect = 3e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || ||||| ||||| | | || ||| |||| ||||| ||||| || || || | Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| | ||| || || ||||| |||||||| || || || |||||| || ||| ||| Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 ||| |||||||||| |||||||||||| || | || || || || ||||| || || | Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 55852 AGATCTGCAT 55861 >seq2870 Length=135571 Score = 131 bits (144), Expect = 1e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||| |||||||| || | || || | |||| ||||||||||| || ||||||| Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | | ||| ||||| || ||||| ||||| ||||| ||||| || ||| ||| ||| Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||||||| | |||||||| || || | |||||| || || | ||||| || | Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 19770 AAATCTGCAT 19761 >seq664 Length=484775 Score = 105 bits (116), Expect = 5e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 || || || |||||||||| | ||| | |||| || || ||||| || ||||| ||| Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 |||||||| || || || ||||| || || || || ||||| || ||| || | || Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461 | ||||| || | || ||||| || |||| || || ||||| | || || |||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 101462 ATCTGCAT 101469 |||||||| Sbjct 443874 ATCTGCAT 443867 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || ||||||||||||| | |||| | |||| || | ||||| || ||||| | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| |||||||| || || || || || || || || ||||| || || ||| ||| Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 ||| || || || | || ||||| | ||| | || || || || ||||| || || | Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 440767 AGATCTGCAT 440758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396235435495872