Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2870 113 3e-20 seq3317 111 1e-19 seq664 107 1e-18 >seq2870 Length=135571 Score = 113 bits (124), Expect = 3e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||||||||||||||| ||||| || | || | || ||||| ||||| || ||||||| Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || | ||| ||||| | |||| || ||||| || |||||| ||| ||| Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | || || | |||||| |||| ||||||||||| ||||| | ||||| || | Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 48757 AAATCTGCAT 48766 |||||||||| Sbjct 19770 AAATCTGCAT 19761 >seq3317 Length=93551 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| |||||||| ||||||||||| | | | || ||||||||||| ||||| || | Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| || ||| || || | || | ||| |||||||| || ||| || ||| Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | || ||||| ||||| || | |||||| || |||||||||||||| || || | Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 48757 AAATCTGCATC 48767 | ||||||||| Sbjct 55852 AGATCTGCATC 55862 >seq664 Length=484775 Score = 107 bits (118), Expect = 1e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638 || ||||| |||||||| |||||| | ||| | || || |||||||| || ||||| ||| Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCC 48698 | ||||| || || | ||||| ||||||||||| |||||| ||| || | Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 48699 ACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAA 48758 | | ||||| | ||| || |||| || || || ||||| |||| || || ||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 48759 ATCTGCATC 48767 ||||||||| Sbjct 443874 ATCTGCATC 443866 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| |||||||||||||| || || |||| | || || | |||||| || ||||| | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| |||||||| || | || | ||||||||||| |||||| || ||| Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | ||||| | ||| || || | || || || || || |||||||| || || | Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 48757 AAATCTGCATCGTGT 48771 | ||||||||| ||| Sbjct 440767 AGATCTGCATCCTGT 440753 Score = 82.4 bits (90), Expect = 6e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||||||||||||||||||||| | || | || ||||||||||| || ||||| | Sbjct 441409 CTTTTTGAATATTGTAATCAGATAGGGTACGTCCATCTTCCAACTGCTTTCCAGCAAAAA 441350 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCT 48669 ||| ||||| || || | ||||| || |||| Sbjct 441349 TCAAACGCTGCTGGTCAGGGGGAATCCCTTCCT 441317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380896298745408