Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq361 91.5 3e-13 seq4065 84.2 4e-11 >seq361 Length=596180 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || |||||||| |||||||| ||||| |||||| ||||| || ||||| Sbjct 1709 CTGGAATTCTCCTGAGAGGACCCTCCTAGTGTAAATGTTTGATGTGTATGGTTCGATTGA 1650 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 ||| |||||||||| ||| || || || ||||||||||| || |||| Sbjct 1649 CTCATTGTTCCCCAAAATTTGAGCTGTAGAAGCTGTGGGCATAGGTGCCA 1600 >seq4065 Length=69253 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| || || |||||||| || || || |||||||| || || || || || || Sbjct 27735 GTACATTTCTGAATGCACATTTTCCATTGCAATCTGGAAGCCATAAAAACACCGCGCTTC 27676 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | || || ||| | ||| || |||| ||||| || || || || |||||||| Sbjct 27675 GGGTATTTGTACCTCTTGGCTGAACCTTTCCACGAGATTTTCGTTCACAATGCCATCTGA 27616 Query 48544 AGCAGCAAAGAAGGCAAGGACATG 48567 ||||||||| |||||||| ||||| Sbjct 27615 AGCAGCAAAAAAGGCAAGTACATG 27592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931429213552640