Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3317 127 4e-24 seq2870 109 1e-18 >seq3317 Length=93551 Score = 127 bits (140), Expect = 4e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| || || ||||| | ||| || ||||| || |||||||| ||||| | Sbjct 66997 ATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAATTAAGCGT 67056 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| || || || |||||||||||||| |||||| || ||||| || | Sbjct 67057 TGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCAATTGTG 67116 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| ||||||| |||||| || || || || | ||||| | ||| || ||| Sbjct 67117 TCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAAAGATTTGC 67176 Query 192535 ATTTT 192539 ||||| Sbjct 67177 ATTTT 67181 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||||||||||| || | |||| ||||| || || || || || || |||||| Sbjct 55680 ATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAATCAATCTC 55739 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || ||||| || || ||||| || || |||||||| || ||||| ||| | Sbjct 55740 TGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTTCTATTGTG 55799 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || |||| ||| ||||| || ||||| || || || || || || || | || |||||| Sbjct 55800 TCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGAAGATCTGC 55859 Query 192535 AT 192536 || Sbjct 55860 AT 55861 >seq2870 Length=135571 Score = 109 bits (120), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| || ||||| | || || |||| |||||||| || |||||||| || | ||| Sbjct 19942 ATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATAAGCCTC 19883 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || |||||||| ||||| || || || ||| ||||| || | Sbjct 19882 TGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCAATTGTG 19823 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||| || ||||| |||||||| || | ||||| | || |||||| Sbjct 19822 TCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAAATCTGC 19763 Query 192535 ATTTT 192539 ||||| Sbjct 19762 ATTTT 19758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984367788969600