Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3317 122 2e-22 seq664 118 2e-21 >seq3317 Length=93551 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| || |||| ||| | || || ||||| || |||||||||||||| | Sbjct 66997 ATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAATTAAGCGT 67056 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||| || || || || |||||||||||||| |||||| || ||||| || || Sbjct 67057 TGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCAATTGTG 67116 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||||| ||||||| |||||| || || || || | ||||| | || || ||| Sbjct 67117 TCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAAAGATTTGC 67176 Query 172068 Atttt 172072 ||||| Sbjct 67177 ATTTT 67181 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| |||| | | | || ||||| || || || || ||||| ||||| Sbjct 55679 AATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAATCAATCT 55738 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| |||||||| || || ||||| || || |||||||| || ||||| ||| || Sbjct 55739 CTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTTCTATTGT 55798 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || |||| ||| ||||| || ||||| || || || || || || || | ||| ||||| Sbjct 55799 GTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGAAGATCTG 55858 Query 172067 CAt 172069 ||| Sbjct 55859 CAT 55861 >seq664 Length=484775 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||| || | | ||| | || || | || || ||||||||||| || | Sbjct 440940 AATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCG 440881 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||||||||| ||||| || || || || || || || ||||| ||| || Sbjct 440880 CTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTTCTATCGT 440821 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| | |||||||||| ||| ||||| || ||||| || || || | ||| ||||| Sbjct 440820 ATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGAAGATCTG 440761 Query 172067 CAt 172069 ||| Sbjct 440760 CAT 440758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905035348876800