Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3317 114 1e-20 seq445 98.7 9e-16 seq664 82.4 7e-11 >seq3317 Length=93551 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 || |||||||||||| | || || | || || || ||||||||||| ||||| ||||| Sbjct 55865 TAGGATGCAGATCTTCGTGAAGACTTTGACGGGAAAGACTATTACGCTTGAAGTGGAAGC 55806 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | |||||| |||||| || || ||| || || ||||| ||||| || || || || Sbjct 55805 GTCTGACACAATAGAAAATGTGAAGGCAAAAATACAGGACAAGGAAGGCATCCCGCCTGA 55746 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 || || | ||||| || ||||| || ||| |||| ||| || | | | || ||||| Sbjct 55745 CCAGCAGAGATTGATTTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTATCTGATTA 55686 Query 24880 TAACATTCA-AAAGG 24893 ||| ||||| ||||| Sbjct 55685 TAATATTCAGAAAGG 55671 Score = 111 bits (122), Expect = 1e-19 Identities = 140/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || || || ||||| | ||||| ||| | | Sbjct 67178 ATGCAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGAAGTCGAATCATCT 67119 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || ||||| |||||||| || |||||||||||| Sbjct 67118 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGATCAA 67059 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| || || ||||| || || || | |||||| ||| |||| ||||| ||| Sbjct 67058 CAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAATCGAACTTTGTCCGATTACAAC 66999 Query 24884 ATTCA-AAAGG 24893 || || ||||| Sbjct 66998 ATACAGAAAGG 66988 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || ||||| || ||||| ||| | || || ||| || | Sbjct 54280 ATGCAGATCTTCGTTAAGACCCTTACCGGCAAGACTATCACGTTAGAGGTGGAACCCTCT 54221 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | || || |||||||| ||||| ||||| || || || || || Sbjct 54220 GACACAATAGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 54161 Query 24824 CAACGTTTGATCTTT 24838 || || | |||||| Sbjct 54160 CAGCGACTCATCTTT 54146 >seq445 Length=1857890 Score = 98.7 bits (108), Expect = 9e-16 Identities = 91/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATT-CGA 24863 ||| || ||||| ||||| ||||| ||||||||||| || || ||||| |||||| | | Sbjct 1798550 AGGTATCCCTCCTGATCAGCAACGATTGATCTTTGCTGGAAAGCAGCTAGAGGATAACAA 1798491 Query 24864 GAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 || | | ||||| ||||||||||||||||| || ||| |||| || |||||| Sbjct 1798490 GACTC-TATCAGACTATAACATTCAAAAGGAGTCTACATTACATTTAGTGTTG 1798439 >seq664 Length=484775 Score = 82.4 bits (90), Expect = 7e-11 Identities = 162/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 24664 AATGAAATTATAA-TAAGTAGTTGATAAACTGATTGAT---ACGATGCAGATCTTTATTA 24719 || |||||||||| | | ||| |||| | ||| || | |||||||||||| | | Sbjct 440715 AAAGAAATTATAACTGTGCAGTAAATAATTT-ATTAATTACAGGATGCAGATCTTCGTCA 440773 Query 24720 AAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGG 24779 | || | || || || || || || | |||||||| | | || || |||||| | Sbjct 440774 AGACTTTGACTGGGAAGACCATAACTTTAGAAGTAGAGCCTTCAGATACGATAGAAAATG 440833 Query 24780 TAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTG 24839 | || ||||| || ||||| || ||||| || || || ||||| || ||||| |||| Sbjct 440834 TCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCTGACCAACAGCGGTTGATTTTTG 440893 Query 24840 CCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCA-AAAGG 24893 | || || ||||| || ||| ||| | || ||||| || ||||| ||||| Sbjct 440894 CTGGAAAGCAGCTCGAAGATGGCCGAACGCTTTCCGATTACAATATTCAGAAAGG 440948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449847571386880