Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2751 293 2e-73 seq2674 127 2e-23 seq407 91.5 1e-12 seq1838 89.7 4e-12 >seq2751 Length=137355 Score = 293 bits (324), Expect = 2e-73 Identities = 637/942 (68%), Gaps = 10/942 (1%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| || || || || ||| || || ||||| | ||||||||||| || Sbjct 71027 ATTTGTAATGGTGATCTTATTCTCCTTGCCAGTGGACTTATCCACTGCAGTCACATTCAG 70968 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||||||||| | |||||| || ||||||||||||||||| || | ||||||| Sbjct 70967 GATACCATTGGCATCAATATCAAAGGTAACTTCAATTTGAGGGACTCCACGAGGAGCAGG 70908 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 || || || | | ||| |||||| ||| || ||||| || | | || || Sbjct 70907 AGGAATGCCAGTTAGCTCGAATTTTCCCAATAGATTGTTGTCTTTGGTCATGGTACGCTC 70848 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 || || | | |||||| || ||| || |||||||| || ||||| || | | | Sbjct 70847 TCCTTCATACACTTGGATCAACACACCAGGCTGGTTATCTGAGTATGTTGTGAA-AGTTT 70789 Query 281620 GGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 || ||| ||| ||||| || ||||| | | || | ||||| | ||||||| Sbjct 70788 GGGTTTGCTTAGTTGGAATGGTAGTGTTACGCTTGATTAGGGCAGTCATCACTCCACCAG 70729 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 |||| || | ||| | || | |||||| ||||||| || | || | || | | Sbjct 70728 CTGTCTCAATACCCAAGGATAAAGGAGTAACATCAAGCAGCAGAAGGTCCTGCACAGCCT 70669 Query 281739 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 || | | ||| || || || ||||| | |||||| ||||| || |||||||||| Sbjct 70668 CAGACTTATCTCCATGTAGGATGGCAGCTTGCACAGCAGCTCCATAAGCCACAGCTTCAT 70609 Query 281799 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTT 281857 |||| || | || | ||| | | || ||||||||||| | ||| || ||| | | Sbjct 70608 CAGGGTTGATAGACTTATTCAACTCCTTTCCATTGAAAAAGTCTTGCAA-AAGCTTTTGA 70550 Query 281858 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917 | |||||||||||| | || || |||||||| || || ||||| | ||| || || ||| Sbjct 70549 ATCTTAGGAATACGCGTGGAACCCCCAACTAAAACGATGTCATGAATCTGAGACTTGTCC 70490 Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAA 281977 | ||| | ||| || ||| ||||| |||||||| | | ||||| |||| | Sbjct 70489 ATTTTCGCATCTCTCAAGGATTTCTCAACTGGTTCAAGGGTACTACGAAACAGATCTGCA 70430 Query 281978 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACA 282035 ||| || || || |||| || || || || | || || ||||| ||||| |||| Sbjct 70429 TTAAGCTCCTCAAACCTAGCCCTGGT--GATGGATGTGTAAAAGTCAATCCCTTCAAACA 70372 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 | || |||| |||||| ||| || || |||||||| || | ||| || || | |||| Sbjct 70371 ATGAGTCAATTTCAATGCTAGCCTGGGTGGAAGAAGACAGGGTACGCTTTGCCCTCTCAC 70312 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAAATCTGTTTTATATTTT 282154 | ||||| || |||| || ||| | | || ||| | | | ||| | || || || Sbjct 70311 AAGCTGTTCTCAGTCGTC-TAACTGCTCTCTTGTTTGGTGTAAGATCCTTCTTGTACTTC 70253 Query 282155 CTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 282214 |||||||| |||| |||| | | || | | |||||| || || ||||||||||| Sbjct 70252 CTCTTGAATTCTTGAACAAAGTGGTTGACCATCCTATTATCGAAGTCCTCACCTCCCAAA 70193 Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTA 282274 | || | ||| | || | | |||| || | |||||| || | | ||||| | | Sbjct 70192 TGGGTGTCTCCCGCAGTTGACTTAACTTCAAAGATTCCATCCTCTATGGTCAAAATGGAA 70133 Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||||| || || ||||||| ||| || || || |||||| Sbjct 70132 ACATCAAAAGTGCCCCCACCCAAATCGAATATCAGAACATTC 70091 Score = 87.8 bits (96), Expect = 1e-11 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||||| ||| || |||||||||||||| |||| || || || || | ||||| | Sbjct 68598 CTTGATTTTTAGCGGCATCTCCAATCAGGCGTTCAGTGTCGGTGAACGCCACATAACTAG 68539 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 ||||||| || || || || ||||| || || ||||| || || |||| || | || | Sbjct 68538 GAGTTGTTCGGTTCCCCTGGTCATTGGCGATGATTTCTACCTTTCCATGCTGAAACACGC 68479 Query 282840 CTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||||||| | || || || | ||||||||||| Sbjct 68478 CTACACACGAGTATGTGGTCCCCAGATCAATACCAA 68443 >seq2674 Length=435537 Score = 127 bits (140), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 |||||| | |||||| || |||||||| | ||||| | ||||||||| | || Sbjct 366159 CAAAAGGGAGACATCAAAAGTACCACCACCAAGGTCAAACACCAGTACATTCTTCTCGCC 366100 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 ||| |||| || | ||||| |||| ||||||||||| || |||||||| ||||| Sbjct 366099 CTCTC---TTTTGTCCAAGCCATATGCAATGGCAGCAGCAGTGGGCTCATTAATGATTCT 366043 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 || ||| | ||||||| ||| | || ||||| || || ||||| | || | ||| || Sbjct 366042 CATAACTTGGAGACCAGAAATGGTACCAGCATCCTTTGTTGCTTGACGCTGAGCATCATT 365983 Query 282445 AAAATATGCAGGAACAGTAATAACGGCAT 282473 ||||||||||||||||| | ||| |||| Sbjct 365982 GAAATATGCAGGAACAGTGACAACTGCAT 365954 >seq407 Length=487326 Score = 91.5 bits (100), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 401556 AATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAATGGAGCTGAAGG 401615 ||| || |||| || |||| |||||| || ||||||||| | || ||||||||||| || Sbjct 405635 AATAGAGCCTGAATACTATGTTCCTATAATACCAATGATATTAGTTAATGGAGCTGATGG 405576 Query 401616 AATTGGTACTGGATATTCAACAAAAATTTATCCTTGTAATCCTCGAGATATTATCGCAAA 401675 ||||||||||| | ||||||||| | |||||| ||||| || | ||||| Sbjct 405575 TATTGGTACTGGTTGGATGACAAAAATTCCAAACTATAATCCACGAGAGATAGTAGCAAA 405516 Query 401676 CATCAAAAGACTT 401688 ||| || |||||| Sbjct 405515 CATTAAGAGACTT 405503 >seq1838 Length=465301 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||| | ||| |||||||| | ||||| || ||||| || | ||||||||| Sbjct 117400 GGTAAGGAAGGCAGAATTCGAGGAAATCTCATGGGGAAACGTGTTGACTTCTCTGCACGT 117459 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| | ||||| ||| | | | ||||||||||||| | ||| Sbjct 117460 ACTGTCATTACTCCAGATCCAAATTTAAGAATTGACCAAGTTGGTGTTCCACGTTCCATT 117519 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 || |||||||||| ||| ||||| ||||| Sbjct 117520 GCACAAAATCTTACATTTCCAGAAATAGTAAC 117551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740193643994496