Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq664 158 2e-33 seq3317 156 8e-33 seq2870 150 4e-31 seq346 95.1 2e-14 >seq664 Length=484775 Score = 158 bits (174), Expect = 2e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| ||||| ||||| || || ||| || ||||| || || ||||||||||| | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | | ||||| || || || ||||| ||||| || |||||||| || || ||||||| Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | |||||||| ||| |||||||| |||||||| ||||| || ||||| ||||| || | Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 440767 AGATCTGCAT 440758 Score = 132 bits (146), Expect = 9e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682 ||||| || || ||||| |||||| | | ||| || |||| || ||||||||||| || Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742 | | || || || || || || || ||||| || |||||||| ||||| || || ||| Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802 || || || || |||||||||| || || ||||| || |||| |||||| |||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 82803 ATCTGCAT 82810 |||||||| Sbjct 443874 ATCTGCAT 443867 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || |||||||| ||||| || || ||||| || || || || |||||| Sbjct 443626 CCTTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCTGAGGGCTCAACTTCC 443567 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| || || | ||||| |||||||||||||| Sbjct 443566 AGGGTTATGGTCTTTCCGGTGAGGGTCTTCACAAATATCTGCAT 443523 >seq3317 Length=93551 Score = 156 bits (172), Expect = 8e-33 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||||||||| || ||||| || | | ||| | || |||| ||| ||||||||||| | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 ||| | ||||||||| ||||| || ||||| ||||||||||| || || || ||||||| Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| || ||| | ||| ||||| ||||| || ||||| ||||||| || || |||| Sbjct 67109 CAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAA 67168 Query 82801 ATATCTGCATTATT 82814 | || |||||| || Sbjct 67169 AGATTTGCATTTTT 67182 Score = 131 bits (144), Expect = 3e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| ||||||||||||||||| | || || ||||| | || ||||| || || | Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | ||| || || || || || || |||||||| || || || ||||| || ||||||| Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || || ||| | ||| ||||| | || || ||||| || ||||| ||||| || | Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 55852 AGATCTGCAT 55861 >seq2870 Length=135571 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||| || ||||| || ||||| || | | || ||||| | ||| || |||||||| | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | || || || ||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| || ||| || || ||||||| || ||||| || || || | ||| || || | Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 82801 ATATCTGCATT 82811 | ||||||||| Sbjct 19770 AAATCTGCATT 19760 >seq346 Length=1445323 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 198514 TAGGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATAT 198573 ||||||||||||||||||| || ||| | ||||| | || |||| |||| | || |||| Sbjct 1111337 TAGGTTGTATGTGGTCTATATGTGGAATCCATGACCAAGGGTGGGCAGAACGCCCCATAT 1111278 Query 198574 TTGGGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTTGCTGCAT 198633 ||||||| ||| | ||||||| ||||| || | ||| || |||||||| || || | Sbjct 1111277 TTGGGAAAATACGGTATATGACATATGATGGATGCAAGCGCAAGTTTGATGTGGCAGCTT 1111218 Query 198634 TT 198635 || Sbjct 1111217 TT 1111216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981715291335744