Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3317 102 8e-17 seq664 98.7 1e-15 seq2870 86.0 6e-12 >seq3317 Length=93551 Score = 102 bits (112), Expect = 8e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || || |||||||||||||| |||||| ||||| | | Sbjct 53778 ATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 53837 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | |||||| | ||| ||||| || | |||| ||| ||||| || || || || ||| Sbjct 53838 TCTATCGTGTCAGAGGGTTCCACCTCTAACGTGATGGTCTTGCCAGTGAGGGTCTTCACG 53897 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 53898 AAGATCTGCAT 53908 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || || |||||||||||||| |||||| ||| | | | Sbjct 54150 ATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 54209 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||||| | ||| ||||| || | |||| || |||||||| || || || ||| Sbjct 54210 TCTATTGTGTCAGAGGGTTCCACCTCTAACGTGATAGTCTTGCCGGTAAGGGTCTTAACG 54269 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 54270 AAGATCTGCAT 54280 >seq664 Length=484775 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529 ||||||| |||||||||||| | ||| | | | || ||||||||||| || || || Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCA-TCTTCGAGCTGCTTTCCAGCAAAA 440889 Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 || | |||||| ||||| || ||||| || |||||||| ||||| ||||| | Sbjct 440888 ATCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTT 440829 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||| || | ||||| || || | || | ||| || || |||| ||| || ||| Sbjct 440828 TCTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACG 440769 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 440768 AAGATCTGCAT 440758 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| || ||||||||| || | | |||| ||||| | |||||| || || ||| Sbjct 444054 TTCTGAATGTTGTAATCGG--ATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | ||||||||||| || || || || |||||||| ||||| || | | || Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCT 443937 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 ||| ||||| | |||||| || || | ||||| || || |||||||| || || || | Sbjct 443936 CAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAA 443877 Query 133651 AAATCTGCAT 133660 | |||||||| Sbjct 443876 ATATCTGCAT 443867 >seq2870 Length=135571 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 |||| || |||||||| || | |||| | || || | ||||| || || | | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | |||| |||||| || ||||| || |||||||| || ||||| || | | | Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 ||| ||||| | ||||||||| || | ||| | ||||| || || || ||||| |||| Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 133651 AAATCTGCAT 133660 |||||||||| Sbjct 19770 AAATCTGCAT 19761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483367043607040