Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3317 104 6e-17 seq2870 95.1 3e-14 >seq3317 Length=93551 Score = 104 bits (114), Expect = 6e-17 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 206157 TAAGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGA 206216 ||| || |||||| || || ||| ||||| || |||||||| || || ||||| || Sbjct 67188 TAAAGCAAAAATG---CAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGA 67132 Query 206217 AGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAAT 206276 ||| ||| ||||||||| | ||| || ||| || |||||||| |||||||| || Sbjct 67131 AGTCGAATCATCTGACACAATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGTAT 67072 Query 206277 TTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTT 206336 | || || ||| | | || || || |||||||| || || ||| | ||||| Sbjct 67071 TCCTCCCGATCAACAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAATCGAACTTT 67012 Query 206337 GGCCGATTACAACGTCCAGAAAG 206359 | ||||||||||| | ||||||| Sbjct 67011 GTCCGATTACAACATACAGAAAG 66989 Score = 96.9 bits (106), Expect = 8e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || || || | ||||||||| ||||||||| | ||| || ||| | Sbjct 55837 ACGGGAAAGACTATTACGCTTGAAGTGGAAGCGTCTGACACAATAGAAAATGTGAAGGCA 55778 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || || || || ||||| || ||| ||| || ||| | || |||||||||||| Sbjct 55777 AAAATACAGGACAAGGAAGGCATCCCGCCTGACCAGCAGAGATTGATTTTCGCCGGAAAG 55718 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 |||||||||||||| ||||| | | ||||| || | ||||||| Sbjct 55717 CAGTTGGAAGATGGCAGGACCCTATCTGATTATAATATTCAGAAAG 55672 >seq2870 Length=135571 Score = 95.1 bits (104), Expect = 3e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||||||||| || |||||||| || |||||||||| ||||||||| | ||| Sbjct 19776 AAAACGCTCACGGGTAAAACGATTACCCTGGAAGTGGAGCCCTCTGACACAATTGAAAAT 19835 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| |||||||| || || ||||||||| || || || || ||||| || Sbjct 19836 GTGAAAGC-CAAGATTCAGGATAAGGAAGGAATTCCTCCAGATCAGCAGAGGCTTATATT 19894 Query 206304 CGCCGGAAAGCAGTTGGAAGATGG 206327 || || ||||| ||||||||||| Sbjct 19895 TGCTGGGAAGCAATTGGAAGATGG 19918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181686096065216