Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq4512 95.1 4e-16 seq71 95.1 4e-16 seq1924 91.5 5e-15 seq29 86.0 2e-13 seq144 82.4 2e-12 seq1588 80.6 8e-12 seq225 78.8 3e-11 >seq4512 Length=58960 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 37594 GCCGAAATAGCTGAGTTGGGAGAGCGTTAGACAGAAGATCTAAAGGTCCCTGGTTCAATC 37653 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37654 CCGGGTTTCGGC 37665 >seq71 Length=1193462 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||| |||||||||||||||||||||||||| | | Sbjct 1170777 GCCGAAATAGCTCAGTTGGGAGAGCGTTACACTGAAGATCTAAAGGTCCCTGGTTCTATC 1170836 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1170837 CCGGGTTTCGGC 1170848 >seq1924 Length=340195 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct 161605 GGCCGAAATAGCTCAGTTGAGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTAGTTCAAT 161664 Query 2828 CCCGGGCTTCAGC 2840 | |||| ||| || Sbjct 161665 CTCGGGTTTCGGC 161677 >seq29 Length=1976535 Score = 86.0 bits (94), Expect = 2e-13 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||| | Sbjct 1133925 GCCGAAATAGCTCAGTGGGGAGAGCGTTAGACTGAAGATCTTAAGGTCCCTGGTTCAATC 1133984 Query 2829 CCGGG 2833 |||| Sbjct 1133985 TCGGG 1133989 >seq144 Length=745686 Score = 82.4 bits (90), Expect = 2e-12 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 |||| || ||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 84604 TTATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCC 84658 >seq1588 Length=399224 Score = 80.6 bits (88), Expect = 8e-12 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| | |||||||||||||||| |||||||||||||||||| || |||||| | | |||| Sbjct 239060 GAAATGGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTTCCTGGTACGATCCCG 239001 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 239000 GGTTTCGGC 238992 >seq225 Length=1076808 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 16462 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCC 16512 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| ||| |||||||| |||| |||||||||||||||||| ||||||||||||| ||| Sbjct 33638 GAAATAGTACAGTTGGGCGAGCGTTAGACTGAAGATCTAAACGTCCCTGGTTCAATTCCG 33579 Query 2832 GGCTTC 2837 || ||| Sbjct 33578 GGTTTC 33573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848057833920