Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3317 104 2e-17 seq664 100 3e-16 seq2870 98.7 9e-16 seq445 89.7 5e-13 >seq3317 Length=93551 Score = 104 bits (114), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || ||||| | | ||| | | || |||| |||||| || || || Sbjct 55671 CCTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAA 55730 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||||||||| | || | || ||||||||| || ||| ||||| | || Sbjct 55731 ATCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTT 55790 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || |||||| || | ||| || || || ||||||||||| ||||| Sbjct 55791 TCTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACG 55850 Query 35726 AATATCTGCATTCT 35739 || |||||||| || Sbjct 55851 AAGATCTGCATCCT 55864 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/199 (70%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 35541 TACTCTCCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 |||| ||||| || ||||||||||||| ||| ||||| | || || | ||||| || Sbjct 66982 TACTAACCTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCA 67041 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTT 35658 ||||| || || || || || || | ||||| | || ||| | ||| ||| | ||| Sbjct 67042 GCAAAAATTAAGCGTTGTTGATCGGGAGGAATAC-CTTCTTTATCTTGAATTTTAGCCTT 67100 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | || | | ||||| ||||| || || | || || || || || |||| ||| Sbjct 67101 AACATTTTCAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGT 67160 Query 35719 TTTCACAAATATCTGCATT 35737 ||||||||| || |||||| Sbjct 67161 TTTCACAAAGATTTGCATT 67179 >seq664 Length=484775 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| |||||||||||||||| | || || | || || | |||||| || ||||| | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||| | |||| | |||||||||| ||||| |||| | Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCT 443937 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| | || || |||| ||||| || || || |||| || ||||||| Sbjct 443936 CAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAA 443877 Query 35727 ATATCTGCAT 35736 |||||||||| Sbjct 443876 ATATCTGCAT 443867 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| |||||||||| | ||||| | || || |||||||| || ||||| Sbjct 440948 CCTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAA 440889 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||||||| ||||| | || | | |||||||||| ||||| ||| | | || Sbjct 440888 ATCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTT 440829 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| || | || || || | || || || || || |||||||| || || Sbjct 440828 TCTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACG 440769 Query 35726 AATATCTGCATTCTGT 35741 || |||||||| |||| Sbjct 440768 AAGATCTGCATCCTGT 440753 >seq2870 Length=135571 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 |||||||| ||||| || | | || ||| | || |||| ||||| || |||||||| Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668 | || |||||| || | ||||| | ||||| ||| ||||| |||| | || | Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCA 19829 Query 35669 ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAAT 35728 | ||||| | ||||| |||| || |||||||||||||| | |||||||| || Sbjct 19828 ATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAA 19769 Query 35729 ATCTGCATTCTG 35740 ||||||||| || Sbjct 19768 ATCTGCATTTTG 19757 >seq445 Length=1857890 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| ||||||||| |||||||| ||| ||||||||||||||| || || | Sbjct 1798425 CCACCACGTAGCCTCAACACTAAATGTAATGTAGACTCCTTTTGAATGTTATAGTCTGAT 1798484 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || | || || |||||||| || ||||| ||||| || ||||| || | ||| Sbjct 1798485 AGAGTCTTGTTATCCTCTAGCTGCTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGG 1798543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450743471751680