Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4065 111 2e-19 seq361 111 2e-19 seq2351 104 3e-17 >seq4065 Length=69253 Score = 111 bits (122), Expect = 2e-19 Identities = 131/175 (75%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 39877 ATCTTTAACATATGTATCTATTAACAGACTA-TACATTTCTGAATGGATGTTTTCAATCG 39935 |||||||| || ||||| || | | || | |||||||||||||| | ||||| || | Sbjct 27765 ATCTTTAATGTAAGTATCGATGAGTA-ACGAGTACATTTCTGAATGCACATTTTCCATTG 27707 Query 39936 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTT 39995 | ||||| || || |||||||| | ||||| | |||||||||||| | || |||| Sbjct 27706 CAATCTGGAAGCCATAAAAACACCGCGCTTCGGGTATTTGTACCTCTTGGCTGAACCTTT 27647 Query 39996 CCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATG 40050 || | | |||||| ||||| || ||||| ||| |||||||| || | |||||| Sbjct 27646 CCACGAGATTTTCGTTCACAATGCCATCTGAAGCAGCAAAAAAGGCAAGTACATG 27592 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || || | ||||||||| ||| | |||||||||||||| || ||||| || ||||| ||| Sbjct 27452 TTCGAAAGATCTACTTCCTCAACAGTCCAAAACGACGCTTCCGCCTTCTTATACATCTTC 27393 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATC 40199 |||||||| |||| || || |||||||| || |||| Sbjct 27392 CATATATCGTGATACTGAATAGGAAAAATGACGAATC 27356 >seq361 Length=596180 Score = 111 bits (122), Expect = 2e-19 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || ||||| |||||||| || || | || ||| || | |||||||||||| || || Sbjct 1365 GACCCTTTATAGGTTTCATAGGGACCGTACTTTTCTGCAAATTCACAACTTGCTTCCAAG 1306 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 ||||| || ||||| ||||| || |||||||| || | || | || | ||| || Sbjct 1305 GCACCATAGTAAATAGTTTCAAATATCTTCTTGTTCAAGTCCCGAGCACCCTCACTGTCA 1246 Query 69067 AATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAG 69124 || || || | | ||| || || | || ||||| || ||||| |||||||| || | Sbjct 1245 AAAGG-CAACCTCATTAAG-ATGAAAGTGTCAGCCAACCCTTGAACACCAATACCAATGG 1188 Query 69125 GTCTATGTCTCTTATTTGA 69143 ||||||||||| ||||||| Sbjct 1187 GTCTATGTCTCATATTTGA 1169 >seq2351 Length=162851 Score = 104 bits (114), Expect = 3e-17 Identities = 152/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 ||||||||||| || |||| |||| || ||||| ||||| |||| ||||| |||| Sbjct 158021 TTATTTCCTCCTTGGTCTACATATCGAGCGGTGTTGTTATACACTCGAAGCATAGGAACT 157962 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 | |||||| || ||||||| || ||||| || ||||| || |||| | ||| Sbjct 157961 ACACCATTGGAAATACCATTGGTGCCAGATATGTAACTGCCAGTTGCTCTAATGCAGTGT 157902 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCA 69924 ||| || || || ||||| || || || | | ||||| | | | ||||||| Sbjct 157901 ATATTCAGCCCAATGCCTCCAGCAGACTTGGACACCAATGCACATTGCCTTAGTGTGTCA 157842 Query 69925 TATATACCCTCTATGCTATCATCTATCA-TGTTA 69957 || |||||||| ||||| |||||| ||| ||||| Sbjct 157841 TAGATACCCTCAATGCTGTCATCTTTCATTGTTA 157808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || || |||||| |||| | || ||||| | ||| || ||||| || | Sbjct 160858 TCAAACTCTTCACCCCAACAATCAGCTAAGCCAGGGCTCTCACGGGGGCACATTAAACTC 160799 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || ||| ||| || ||| || ||||| || | ||| ||||||||||| || ||| || Sbjct 160798 CAAACACCATTGCTCTCAACACGCTTCATGAACAAATCAGGAATCCAAAGGGC-ATAGAA 160740 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | | ||| || || || ||||| || ||||| | ||| | |||||| | Sbjct 160739 GAGATCACGAGCTCTGACCTCCTCCTTCCCTGTGTTCTTTTTCAAATCTAAAAACTCAAA 160680 Query 69696 AATATCAGAATGCCATGGTTC 69716 |||||||||||||| ||||| Sbjct 160679 GATATCAGAATGCCACGGTTC 160659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686832415741440