Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq867 125 6e-24 seq4065 100 2e-16 seq1212 91.5 1e-13 >seq867 Length=826539 Score = 125 bits (138), Expect = 6e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 41010 ATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCAT 41069 ||||| ||||||| ||||| || ||| ||| |||||| | || || || || Sbjct 762983 ATAATGATGTGCGCTTGGAATCCTGTTGACATACCACGAATGGCACTTCCCCCGTGCCAC 762924 Query 41070 TTGTTATGT-CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATC 41128 | | ||| |||||||| ||| |||||||| ||||||| || |||||||| ||||| Sbjct 762923 TGCCT-TGTACAGTTTTATGTTGCGAATGGTGAGTTGTCATGCCAGTTGTATCAGAGATC 762865 Query 41129 AGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATAT 41188 | ||| |||||||| || ||||| || ||||| || || ||||||||||| || ||||| Sbjct 762864 TGCTGATATGGGACTTGGTGTCCCATTCAACATTGCAAGCTATGCTCTGCTGACATATAT 762805 Query 41189 GATTGCACACGTTACCAA 41206 |||||| ||| | || || Sbjct 762804 GATTGCTCACATCACTAA 762787 >seq4065 Length=69253 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43808 TGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCT 43867 ||| || | |||||| ||||| || ||| |||| || | || ||||||||| Sbjct 27553 TGGGTTTCCTTAAAAGAGGAAGAACGCCACTTTTTATCCCATGTACTTGCCTTTTTTGCT 27612 Query 43868 GCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTA 43927 || || || || || || |||||| | || |||| ||||| || ||| || Sbjct 27613 GCTTCAGATGGCATTGTGAACGAAAATCTCGTGGAAAGGTTCAGCCAAGAGGTACAAATA 27672 Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 || ||||| || ||||||||||| || || ||||| || |||||| | ||||| |||||| Sbjct 27673 CCCGAAGCGCGGTGTTTTTATGGCTTCCAGATTGCAATGGAAAATGTGCATTCAGAAATG 27732 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||| | || || ||||| ||||| |||||| Sbjct 27733 TACTCGTTACTCATCGATACTTACATTAAAGAT 27765 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/223 (68%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 44040 TGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAAT 44099 |||||||||| | || ||| | ||| | | | ||||| ||||||| || | | Sbjct 27925 TGTTTAATGCAGTGGAGACATTGCCTTGTGTGAGCAAGAAAGCCCACTGGGCACTGCAGT 27984 Query 44100 GGATAAATTCAAATGATT------CTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGG 44153 |||| | ||| |||| | ||||||||||| |||| |||||||| || | Sbjct 27985 GGAT---TGCAAGTGATAAGGCAACATTTGGAGAACGCATTGTTGCGTTTGCTTCAGTTG 28041 Query 44154 AAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213 |||| || || || || ||||| ||||| |||| |||||| | || || | || | | Sbjct 28042 AAGGAATATTTTTCTCTGGATCATTTGCTTCCATCTTTTGGCTTAAAAAGAGGGGCCTCA 28101 Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 |||| |||||||| || || ||||| | || ||| ||||| Sbjct 28102 TGCCAGGGTTGACCTTCTCCAATGAACTTATTTCTCGAGATGA 28144 >seq1212 Length=870110 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA--- 19608 ||||| ||||| | |||||| | || ||||| ||||| |||||||||| | | Sbjct 628082 CACATCATAATCTTCGATGAAATTGATGCAATTTGTAAAGCCAGAGGTTCTGTGGCAGGA 628023 Query 19609 ---AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | |||||||||||||| || |||||||| ||| || | ||| | || ||||| | Sbjct 628022 GCCACAGGAGTACATGACACAGTGGTCAATCAGCTCTTGGCCAAAATTGATGGTGTAGAG 627963 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 || |||||||||| | |||||||| ||||| || Sbjct 627962 CAGTTGAATAATATCCTTGTTATTGGAATGACCAA 627928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397412907820480