Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq664 145 9e-30 seq3317 136 5e-27 seq2870 129 7e-25 seq445 98.7 1e-15 >seq664 Length=484775 Score = 145 bits (160), Expect = 9e-30 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||||| ||||| ||||| || || || || || ||| | Sbjct 443867 ATGCAGATATTTGTGAAGACGCTGACCGGAAAGACAATCACCCTGGAAGTAGAGCCCTCA 443926 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || |||| || || ||||||||||||||||| ||||| || |||||| Sbjct 443927 GACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGGATTCCCCCTGACCAG 443986 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||||||||| ||||| | ||||||| |||||| ||| | || || || Sbjct 443987 CAGCGTTTGATTTTTGCTGGAAAGCAGTTAGAGGATGGTCGTACTCTATCCGATTACAAC 444046 Query 27586 GTCCAAAAGG 27595 | || |||| Sbjct 444047 ATTCAGAAGG 444056 Score = 125 bits (138), Expect = 8e-24 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| || ||| | || || ||| | Sbjct 440758 ATGCAGATCTTCGTCAAGACTTTGACTGGGAAGACCATAACTTTAGAAGTAGAGCCTTCA 440817 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | ||||| || |||||||||||||||||||| || || ||||| Sbjct 440818 GATACGATAGAAAATGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCACCTGACCAA 440877 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||||||||| ||||| ||||| |||| || || || | || || ||| Sbjct 440878 CAGCGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACGCTTTCCGATTACAAT 440937 Query 27586 GTCCA-AAAGG 27595 | || ||||| Sbjct 440938 ATTCAGAAAGG 440948 >seq3317 Length=93551 Score = 136 bits (150), Expect = 5e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| || || || || || ||||| |||||| | || || || ||| Sbjct 67179 AATGCAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGAAGTCGAATCATC 67120 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| |||| | |||||||||||||| || || || || |||||||| || || Sbjct 67119 TGACACAATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGATCA 67060 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569 || || ||||||||||||| |||||| | |||||| |||| || Sbjct 67059 ACAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAATCGAAC 67015 Score = 116 bits (128), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 27398 TTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG 27457 || ||| ||||| ||||| || ||||| | || || ||||||||||| ||||| || | Sbjct 55869 TTTCTAGGATGCAGATCTTCGTGAAGACTTTGACGGGAAAGACTATTACGCTTGAAGTGG 55810 Query 27458 AGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTC 27517 | | ||| | || | |||| ||||||| ||||| ||||||||||| || || || | Sbjct 55809 AAGCGTCTGACACAATAGAAAATGTGAAGGCAAAAATACAGGACAAGGAAGGCATCCCGC 55750 Query 27518 CAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAG 27577 | ||||||||| | | ||||| || || ||||| | || |||| | |||||| | | Sbjct 55749 CTGACCAGCAGAGATTGATTTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTATCTG 55690 Query 27578 ACTATAATGTCCA-AAAGG 27595 | |||||| | || ||||| Sbjct 55689 ATTATAATATTCAGAAAGG 55671 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||||||||||||||| || | ||||| || | | Sbjct 54280 ATGCAGATCTTCGTTAAGACCCTTACCGGCAAGACTATCACGTTAGAGGTGGAACCCTCT 54221 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || ||||||||||| || ||||| || |||||| Sbjct 54220 GACACAATAGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 54161 Query 27526 CAGCGTCTAATTTTT 27540 ||||| || || ||| Sbjct 54160 CAGCGACTCATCTTT 54146 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || | ||||| || | | Sbjct 53908 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACGTTAGAGGTGGAACCCTCT 53849 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || ||||||||||| || ||||| || |||||| Sbjct 53848 GACACGATAGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 53789 Query 27526 CAGCGTCTAATTTTT 27540 ||||| || || ||| Sbjct 53788 CAGCGACTCATCTTT 53774 >seq2870 Length=135571 Score = 129 bits (142), Expect = 7e-25 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || ||||| || || || || ||||| || || || ||| | Sbjct 19760 AATGCAGATTTTCGTGAAAACGCTCACGGGTAAAACGATTACCCTGGAAGTGGAGCCCTC 19819 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| |||| |||| || || |||||||| ||||| |||||||||||||| || Sbjct 19820 TGACACAATTGAAAATGTGAAAGCCAAGATTCAGGATAAGGAAGGAATTCCTCCAGATCA 19879 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || |||||||| |||||| | || |||| || || || | ||||| || Sbjct 19880 GCAGAGGCTTATATTTGCTGGGAAGCAATTGGAAGATGGGCGCACGCTCTCTGACTACAA 19939 Query 27585 TGTCCAAAA 27593 | | ||||| Sbjct 19940 TATTCAAAA 19948 >seq445 Length=1857890 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || || |||||||| || || |||||||||||| ||| | Sbjct 1799955 ATGCAGATTTTTGTGAAAACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCAGCT 1799896 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||| ||||| |||| |||||| ||| || ||||| |||||||| Sbjct 1799895 GATTCCATTGAAAATGTGAAGGTTAAGATCCAGGATAAGGAGGG 1799852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570246981483520