Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2870 114 8e-21 seq664 107 1e-18 >seq2870 Length=135571 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34519 TTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATT 34578 |||||||| || || || || || || ||| | ||||| | ||| || || |||||||| Sbjct 19948 TTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATATA 19889 Query 34579 AAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA 34638 | | ||| || || || || | ||| ||||| || ||||| ||| | | | Sbjct 19888 AGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTTCA 19829 Query 34639 ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698 |||||||| | ||||||||||| ||| ||||||||||| || | ||||||||| ||| Sbjct 19828 ATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGAAA 19769 Query 34699 ATCTGCATGTTGA 34711 |||||||| |||| Sbjct 19768 ATCTGCATTTTGA 19756 >seq664 Length=484775 Score = 107 bits (118), Expect = 1e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 |||| |||||||| ||||| || || || || | || || | || || || ||||| | Sbjct 444056 CCTTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAA 443997 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT- 34635 | |||||||| ||||| || || | ||||||||||| ||| || | ||| ||| | Sbjct 443996 TCAAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTC-CTGAATCTTGGCTTTCACGTTC 443938 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 ||| |||||| | ||| ||||||| ||| || || || ||||| | ||| |||||| Sbjct 443937 TCAATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACA 443878 Query 34696 AAAATCTGCAT 34706 || |||||||| Sbjct 443877 AATATCTGCAT 443867 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| || ||||| ||||| ||||| | ||||| || || || || ||||| Sbjct 440948 CCTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAA 440889 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || || ||||||||||| || || | |||||||||||| ||||| || | | Sbjct 440888 ATCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTT 440829 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 || || ||| ||| ||||| | ||||| || || || || || || || || Sbjct 440828 TCTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACG 440769 Query 34696 AAAATCTGCAT 34706 || |||||||| Sbjct 440768 AAGATCTGCAT 440758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314695477016768