Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3317 132 4e-26 seq664 118 9e-22 seq2870 96.9 3e-15 seq4229 91.5 1e-13 >seq3317 Length=93551 Score = 132 bits (146), Expect = 4e-26 Identities = 147/192 (77%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||||||||| || ||| | |||||| | ||||| ||| | || Sbjct 67178 ATGCAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGAAGTCGAATCATCT 67119 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||| |||||||| || || ||||||||| Sbjct 67118 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGATCAA 67059 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || || ||||| | || || || ||||| || || | | ||| | || ||||||||||| Sbjct 67058 CAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAAT-CGAACTTTGTCCGATTACAA 67000 Query 27167 CATTCA-AAAGG 27177 ||| || ||||| Sbjct 66999 CATACAGAAAGG 66988 Score = 125 bits (138), Expect = 6e-24 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| ||||||| |||||||||||| |||| Sbjct 55861 ATGCAGATCTTCGTGAAGACTTTGACGGGAAAGACTATTACGCTTGAAGTGGAAGCGTCT 55802 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||| || ||||| |||||||| || || || || Sbjct 55801 GACACAATAGAAAATGTGAAGGCAAAAATACAGGACAAGGAAGGCATCCCGCCTGACCAG 55742 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || |||||||| | |||| | || ||||| || Sbjct 55741 CAGAGATTGATTTTCGCCGGAAAGCAGTTGGAAGATGGCAGGACCCTATCTGATTATAAT 55682 Query 27168 ATTCA-AAAGG 27177 ||||| ||||| Sbjct 55681 ATTCAGAAAGG 55671 >seq664 Length=484775 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||||||| ||| | || || || ||||| || || || Sbjct 443867 ATGCAGATATTTGTGAAGACGCTGACCGGAAAGACAATCACCCTGGAAGTAGAGCCCTCA 443926 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || ||||| ||||| || || || || || || || Sbjct 443927 GACACCATTGAGAACGTGAAAGCCAAGATTCAGGACAAGGAGGGGATTCCCCCTGACCAG 443986 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | || || || || || || || || || | |||||||||||| Sbjct 443987 CAGCGTTTGATTTTTGCTGGAAAGCAGTTAGAGGATGGTCGTACTCTATCCGATTACAAC 444046 Query 27168 ATTCAAAAGG 27177 ||||| |||| Sbjct 444047 ATTCAGAAGG 444056 Score = 100 bits (110), Expect = 2e-16 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 26968 AATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTA 27027 ||||| |||||| || |||||||| || || || ||| |||| || ||| | || | Sbjct 440741 AATTTATTAATT---ACAGGATGCAGATCTTCGTCAAGACTTTGACTGGGAAGACCATAA 440797 Query 27028 CTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAG 27087 || | ||||| || || || || |||| || | ||||| || ||||| ||||| | Sbjct 440798 CTTTAGAAGTAGAGCCTTCAGATACGATAGAAAATGTCAAGGCCAAGATTCAGGACAAGG 440857 Query 27088 AAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTT 27147 | || || ||||| || |||||||| || || | || || || || | ||||| | Sbjct 440858 AGGGAATCCCACCTGACCAACAGCGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGC- 440916 Query 27148 CGACCG-TTTCCGATTACAACATTCA-AAAGG 27177 ||| || ||||||||||||| ||||| ||||| Sbjct 440917 CGAACGCTTTCCGATTACAATATTCAGAAAGG 440948 >seq2870 Length=135571 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || || | ||||| || |||||||| || || Sbjct 19761 ATGCAGATTTTCGTGAAAACGCTCACGGGTAAAACGATTACCCTGGAAGTGGAGCCCTCT 19820 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || ||||| || || ||||| || || || ||||| Sbjct 19821 GACACAATTGAAAATGTGAAAGCCAAGATTCAGGATAAGGAAGGAATTCCTCCAGATCAG 19880 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | |||| || || || ||||||||||| | || | || || ||||| Sbjct 19881 CAGAGGCTTATATTTGCTGGGAAGCAATTGGAAGATGGGCGCACGCTCTCTGACTACAAT 19940 Query 27168 ATTCAAAA 27175 |||||||| Sbjct 19941 ATTCAAAA 19948 >seq4229 Length=101839 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 135505 AGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTC 135564 ||| || |||||||| || ||| | || |||||||||||||| ||||| ||||| ||||| Sbjct 12193 AGAGGGGAAAATGCATGGTTTTCTTCGAATGTATTGGGCAAAGAAGATTTTGGAGTGGTC 12252 Query 135565 TGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGA 135624 | | || | |||||| || | | || | | |||||||| |||||| |||| Sbjct 12253 AGAAAGTCCAGAAGAGGCATTATCAATTTCCATTTATCTTAATGATCGCTACAGCCTAGA 12312 Query 135625 TGGACGCGATTCAAATGGCTACGTAGGT 135652 ||| || ||| ||||||| || || ||| Sbjct 12313 TGGTCGAGATCCAAATGGATATGTCGGT 12340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434870037073920