Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3317 98.7 7e-16 >seq3317 Length=93551 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 ||||||||||| |||||||||||||| || || || ||||| | || |||||| Sbjct 67181 AAAATGCAAATCTTTGTGAAAACTCTGACAGGAAAGACAATTACTTTAGAAGTCGAATCA 67122 Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | ||| || | ||| || || ||||| || ||||||||| |||| | Sbjct 67121 TCTGACACAATTGAAAAT--GTTAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCG 67064 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| ||||||||||| ||||| ||||| || || | || | |||||||||| Sbjct 67063 ATCAACAACGCTTAATTTTTGCTGGAAAGCAATTAGAGGATAATCGAACTTTGTCCGATT 67004 Query 27965 ACAACATCCAAAAAG 27979 ||||||| || |||| Sbjct 67003 ACAACATACAGAAAG 66989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355823817398592