Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3317 132 1e-25 seq664 122 2e-22 seq2870 114 3e-20 seq3789 111 4e-19 seq2695 95.1 3e-14 seq1022 95.1 3e-14 >seq3317 Length=93551 Score = 132 bits (146), Expect = 1e-25 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | |||||||||| |||||||| ||| |||| ||||| ||||| || | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | |||||||| ||||| ||||||||||| || ||||| || || ||| ||| || Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || ||||| || | ||| || ||||| || || ||||| || |||| |||||| | | Sbjct 67109 CAATTGTGTCAGATGATTCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACAA 67168 Query 225704 ACACTTGCATTTT 225716 | | ||||||||| Sbjct 67169 AGATTTGCATTTT 67181 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | ||| ||||| | | || || |||||||| | |||||| || ||||| | Sbjct 55672 CTTTCTGAATATTATAATCAGATAGGGTCCTGCCATCTTCCAACTGCTTTCCGGCGAAAA 55731 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || || ||||| ||||| || ||||||||||| || || ||| ||||||| || Sbjct 55732 TCAATCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGTATTTTTGCCTTCACATTTT 55791 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || ||||| || | |||||| || | ||| || ||||| ||||||||||| || | || Sbjct 55792 CTATTGTGTCAGACGCTTCCACTTCAAGCGTAATAGTCTTTCCCGTCAAAGTCTTCACGA 55851 Query 225704 ACACTTGCAT 225713 | | ||||| Sbjct 55852 AGATCTGCAT 55861 Score = 111 bits (122), Expect = 4e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639 ||||| ||||| || ||||| || ||||| ||||||||||| |||||||| ||||||| Sbjct 54147 AAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 54206 Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699 || || ||||| |||| |||||| ||||||||||| |||||||| || | || || Sbjct 54207 TTCTCTATTGTGTCAGAGGGTTCCACCTCTAACGTGATAGTCTTGCCGGTAAGGGTCTTA 54266 Query 225700 ATGAACACTTGCAT 225713 | ||| | ||||| Sbjct 54267 ACGAAGATCTGCAT 54280 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639 ||||| ||||| || ||||| || ||||| ||||||||||| |||||||| ||| ||| Sbjct 53775 AAGATGAGTCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACA 53834 Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699 || || ||||| |||| |||||| ||||||||||| |||||||| || | || || Sbjct 53835 TTCTCTATCGTGTCAGAGGGTTCCACCTCTAACGTGATGGTCTTGCCAGTGAGGGTCTTC 53894 Query 225700 ATGAACACTTGCAT 225713 | ||| | ||||| Sbjct 53895 ACGAAGATCTGCAT 53908 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 |||||||| ||||||||||| || |||||||| || |||| ||||| || | | ||| Sbjct 53916 CGAAGTCTGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGGGTT 53975 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGC 225578 | ||||||||| |||||||| ||||| Sbjct 53976 CGCCCATCTTCAAGCTGCTTGCCAGC 54001 >seq664 Length=484775 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | ||||||||||| | |||| |||||||| |||||||| ||||| || | Sbjct 440947 CTTTCTGAATATTGTAATCGGAAAGCGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAA 440888 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || |||||||| || || || || |||||||| || ||||| ||| ||| || Sbjct 440887 TCAACCGCTGTTGGTCAGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTTT 440828 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || || ||||| | || || ||||| || || ||||| || |||||||| || | || Sbjct 440827 CTATCGTATCTGAAGGCTCTACTTCTAAAGTTATGGTCTTCCCAGTCAAAGTCTTGACGA 440768 Query 225704 ACACTTGCAT 225713 | | ||||| Sbjct 440767 AGATCTGCAT 440758 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 |||||||||| | ||| | ||||| |||| |||||| ||||| || || | || || Sbjct 444045 TTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATCAAACGCTGC 443986 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || ||||| || |||||||| || ||||| ||||| || ||||||||| Sbjct 443985 TGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATGGTGTCT 443926 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 |||| || || || | ||||| ||||| || |||| Sbjct 443925 GAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCA 443889 >seq2870 Length=135571 Score = 114 bits (126), Expect = 3e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||| | |||||| || | | || | ||||||||| | ||||||||||| || | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 |||| | || || || || ||||| |||||||| || || ||||| |||||| || Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || ||||| |||| ||||| || | || ||||| || ||||| | ||||| | || Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 225704 ACACTTGCATTTT 225716 | | |||||||| Sbjct 19770 AAATCTGCATTTT 19758 >seq3789 Length=77336 Score = 111 bits (122), Expect = 4e-19 Identities = 131/176 (74%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| | |||||||| | |||| || || || ||||| |||||||||||| | || || Sbjct 50397 CCAAATCTACAACGTAGTAGTTACAGCACACGCATTTGTAATGATTTTCTTTATAGTAAT 50456 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTT-CCTTTAATGATTGGTGCTCCTG 7669 || ||||||| || || || ||||| || || ||| |||||||| | || || | | Sbjct 50457 ACCAATTATGATTGGTGGATTTGGAAACTGGTTTGTTACCTTTAATATTAGGGGCCACCG 50516 Query 7670 ATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 |||| ||||| || | || || ||||| || |||||| | ||||| ||| ||||| Sbjct 50517 ATATAGCTTTCCCCCGACTCAATAATATGAGATTTTGACTTCTACCTCCTGCCTTA 50572 >seq2695 Length=121978 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || || || ||||||||||| || || ||||| || || || ||||| || |||||||| Sbjct 77191 AAGATCTGTCCATCAGTAATTGAAATGACATTGGTTGGAATGTAAGCTGACACATCACCA 77132 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||||||||||| | |||||| | ||| || || || ||||||||| Sbjct 77131 GCTTGTGTTTCAATAACAGGGAGGGCAGTAAGGGAGCCACCACCA 77087 >seq1022 Length=298178 Score = 95.1 bits (104), Expect = 3e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| ||||||| || | |||| || || || |||||||| | || || | | || Sbjct 44428 CCAAATTTACAATGTAGTAGTTACAGCACACGCATTTGTTATAACCTTTTTCATATTAAT 44369 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || || | || || || || ||||| || || ||||||||||| | || || || || Sbjct 44368 ACCAATTGTAATTGGTGGATTTGGAAACTGGTTAGTTCCTTTAATATTGGGGGCCCCCGA 44309 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 ||| ||||| || | || || ||||| || |||||| ||||||| ||| ||||| Sbjct 44308 TATAGCTTTACCCCGACTCAATAATATGAGATTTTGACTACTACCTCCTGCCTTA 44254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192395275293824