Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4065 93.3 4e-14 >seq4065 Length=69253 Score = 93.3 bits (102), Expect = 4e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 5045 ATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104 ||| ||||| |||||||||||||||||||||||||| || || ||||| ||| ||||| Sbjct 27444 ATCTACTTCCTCAACAGTCCAAAACGACGCTTCCGCCTTCTTATACATCTTCCATATATC 27385 Query 5105 AGGATACTGAATCGGAAGTATGACAAATC 5133 |||||||||| |||| ||||| |||| Sbjct 27384 GTGATACTGAATAGGAAAAATGACGAATC 27356 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4583 AATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATAT 4642 ||| ||||| || || || || || || ||||| | || ||||||||||||||||| || Sbjct 28133 AATAAGTTCATTGGAGAAGGTCAACCCTGGCATGAGGCCCCTCTTTTTAAGCCAAAAGAT 28074 Query 4643 AGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTAC 4693 | |||||||| ||||| || ||||| ||||| || | |||||||| || Sbjct 28073 GGAAGCAAATGATCCAGAGAAAAATATTCCTTCAACTGAAGCAAACGCAAC 28023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427003299282368