Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq867 116 3e-21 >seq867 Length=826539 Score = 116 bits (128), Expect = 3e-21 Identities = 235/341 (69%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273 |||| |||||| ||||| || || || |||| ||||| || ||||| || || || || Sbjct 762790 GTGATGTGAGCAATCATATATGTCAGCAGAGCATAGCTTGCAATGTTGAATGGGACACCA 762849 Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCAT-CGCTTACGTA 27332 || ||||| || | || ||||| || | ||| || || | ||| |||| ||| || || Sbjct 762850 AGTCCCATATCAGCAGATCTCTGATACAACTGGCATGACAACTCACCATTCGCA-ACATA 762908 Query 27333 AAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCC 27391 |||||| | | ||| ||||||||| ||||| ||||| | | ||| || |||| Sbjct 762909 AAACTGT-ACAAGGCAGTGGCACGGGGGAAGTGCCATTCGTGGTATGTCAACAGGATTCC 762967 Query 27392 AGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTT 27451 | ||||||| || || | || || | ||| || | | || || | || || | Sbjct 762968 AAGCGCACATCATTATCCTTCTATCATTTGGATTTGTACGTAT-AGTTTCAATTACTTGT 763026 Query 27452 GCA-GCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCG 27510 ||| | || ||||| ||| || || |||| | ||| || | || | |||||| Sbjct 763027 GCAAGTTGGTCCACACCCTCTCCAGAATAGTTGTCATGCATCCCCCTATATTTTGCTCCA 763086 Query 27511 AAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||||||||||||| || || ||||| || |||| ||| || Sbjct 763087 AAATGCCTCCATTGAAAACCATACACAGGGCCCAAGTCACC 763127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369467138029376